YHR020W Domains/Motifs and Signal Peptides 
To directly search external databases for Yhr020wp domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Yhr020wp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Yhr020wp domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Yhr020wp | ||
|---|---|---|
| Protein | Motifs in common with Yhr020wp | Other motifs in this protein (but not in Yhr020wp ) |
| Grs1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related Pfam PF00587: tRNA-synt_2b Pfam PF03129: HGTP_anticodon Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description |
TIGRFAMs TIGR00389: glyS_dimeric: glycine--tRNA ligase PRINTS PR01043: TRNASYNTHGLY PANTHER PTHR10745:SF0: GLYCYL-TRNA SYNTHETASE PANTHER PTHR10745: GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| Slm5p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
TIGRFAMs TIGR00457: asnS: asparagine--tRNA ligase PANTHER PTHR22594:SF6: ASPARTYL-TRNA SYNTHETASE PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti Gene3D G3DSA:2.40.50.140: no description PRINTS PR01042: TRNASYNTHASP SUPERFAMILY SSF50249: Nucleic acid-binding proteins |
| Bpl1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Gene3D G3DSA:3.30.930.10: no description |
SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Pfam PF09825: BPL_N Pfam PF03099: BPL_LplA_LipB Pfam PF02237: BPL_C Gene3D G3DSA:3.40.50.880: no description PANTHER PTHR12835:SF4: SUBFAMILY NOT NAMED PANTHER PTHR12835: BIOTIN PROTEIN LIGASE |
| Ses1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Gene3D G3DSA:3.30.930.10: no description Pfam PF00587: tRNA-synt_2b |
PIR superfamily PIRSF001529: Serine-tRNA ligase PANTHER PTHR11778: SERYL-TRNA SYNTHETASE SUPERFAMILY SSF46589: tRNA-binding arm TIGRFAMs TIGR00414: serS: serine--tRNA ligase Gene3D G3DSA:1.10.287.40: no description PRINTS PR00981: TRNASYNTHSER Pfam PF02403: Seryl_tRNA_N |
| Krs1p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Gene3D G3DSA:2.40.50.140: no description Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti TIGRFAMs TIGR00499: lysS_bact: lysine--tRNA ligase SUPERFAMILY SSF50249: Nucleic acid-binding proteins PRINTS PR00982: TRNASYNTHLYS PANTHER PTHR22594:SF4: LYSYL-TRNA SYNTHETASE PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE |
| Gcn2p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Gene3D G3DSA:3.10.110.10: no description Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:3.30.200.20: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF54495: UBC-like Pfam PF12745: HGTP_anticodon2 Pfam PF00069: Pkinase Pfam PF05773: RWD Pfam PF13393: tRNA-synt_His SMART SM00591: no description SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain PANTHER PTHR11042:SF40: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 1 PANTHER PTHR11042: EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATED PIR superfamily PIRSF000660: Serine/threonine-protein kinase, GCN2 type |
| Aim10p | PRINTS PR01046: TRNASYNTHPRO Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description Pfam PF00587: tRNA-synt_2b PANTHER PTHR11451: TRNA SYNTHETASE-RELATED SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related |
PANTHER PTHR11451:SF3: PROLYL-TRNA SYNTHETASE TIGRFAMs TIGR00409: proS_fam_II: proline--tRNA ligase |
| Frs2p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Pfam PF01409: tRNA-synt_2d TIGRFAMs TIGR00468: pheS: phenylalanine--tRNA ligase, alpha subunit PANTHER PTHR11538:SF15: PHENYLALANYL-TRNA SYNTHETASE PANTHER PTHR11538: PHENYLALANYL-TRNA SYNTHETASE |
| Dia4p | Pfam PF00587: tRNA-synt_2b SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Gene3D G3DSA:3.30.930.10: no description |
SUPERFAMILY SSF46589: tRNA-binding arm TIGRFAMs TIGR00414: serS: serine--tRNA ligase PRINTS PR00981: TRNASYNTHSER PANTHER PTHR11778: SERYL-TRNA SYNTHETASE PIR superfamily PIRSF001529: Serine-tRNA ligase |
| Ded81p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
PRINTS PR01042: TRNASYNTHASP Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti TIGRFAMs TIGR00457: asnS: asparagine--tRNA ligase PANTHER PTHR22594:SF6: ASPARTYL-TRNA SYNTHETASE PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE Gene3D G3DSA:2.40.50.140: no description SUPERFAMILY SSF50249: Nucleic acid-binding proteins |
| Rpf1p | SUPERFAMILY SSF52954: Class II aaRS ABD-related |
Pfam PF04427: Brix PANTHER PTHR22734:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22734: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 Gene3D G3DSA:3.40.50.10480: no description SMART SM00879: no description |
| Ths1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related PANTHER PTHR11451: TRNA SYNTHETASE-RELATED Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description Pfam PF00587: tRNA-synt_2b Pfam PF03129: HGTP_anticodon |
SUPERFAMILY SSF55186: ThrRS/AlaRS common domain SUPERFAMILY SSF81271: TGS-like SMART SM00863: Threonyl and Alanyl tRNA synthetase second a TIGRFAMs TIGR00418: thrS: threonine--tRNA ligase PRINTS PR01047: TRNASYNTHTHR PANTHER PTHR11451:SF5: THREONYL-TRNA SYNTHETASE Gene3D G3DSA:3.10.20.30: no description Gene3D G3DSA:3.30.980.10: no description Gene3D G3DSA:3.30.54.20: no description Pfam PF02824: TGS Pfam PF07973: tRNA_SAD |
| Aim22p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Pfam PF03099: BPL_LplA_LipB TIGRFAMs TIGR00545: lipoyltrans: lipoyltransferase and lipoate-protein Gene3D G3DSA:3.90.1550.10: no description PANTHER PTHR12561:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12561: LIPOATE-PROTEIN LIGASE |
| Mst1p | PANTHER PTHR11451: TRNA SYNTHETASE-RELATED Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description Pfam PF00587: tRNA-synt_2b Pfam PF03129: HGTP_anticodon SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related |
TIGRFAMs TIGR00418: thrS: threonine--tRNA ligase PANTHER PTHR11451:SF5: THREONYL-TRNA SYNTHETASE PRINTS PR01047: TRNASYNTHTHR |
| Dps1p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
PRINTS PR01042: TRNASYNTHASP PANTHER PTHR22594:SF10: SUBFAMILY NOT NAMED PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE Gene3D G3DSA:2.40.50.140: no description TIGRFAMs TIGR00458: aspS_nondisc: aspartate--tRNA(Asn) ligase Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti SUPERFAMILY SSF50249: Nucleic acid-binding proteins |
| Frs1p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Gene3D G3DSA:3.30.56.20: no description SMART SM00873: B3/4 domain SMART SM00874: tRNA synthetase B5 domain SUPERFAMILY SSF46955: Putative DNA-binding domain Pfam PF03483: B3_4 Pfam PF03484: B5 TIGRFAMs TIGR00471: pheT_arch: phenylalanine--tRNA ligase, beta subuni PANTHER PTHR10947: PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| Lip2p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
PANTHER PTHR10993:SF0: OCTANOYLTRANSFERASE PANTHER PTHR10993: OCTANOYLTRANSFERASE Pfam PF03099: BPL_LplA_LipB Gene3D G3DSA:3.90.1550.10: no description ProDom PD006086: LIPB_YEAST_Q06005; TIGRFAMs TIGR00214: lipB: lipoyl(octanoyl) transferase |
| Msk1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Gene3D G3DSA:3.30.930.10: no description |
PRINTS PR00982: TRNASYNTHLYS SUPERFAMILY SSF50249: Nucleic acid-binding proteins PANTHER PTHR22594:SF4: LYSYL-TRNA SYNTHETASE PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE TIGRFAMs TIGR00499: lysS_bact: lysine--tRNA ligase Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti Gene3D G3DSA:2.40.50.140: no description |
| Imp4p | SUPERFAMILY SSF52954: Class II aaRS ABD-related |
SMART SM00879: no description Gene3D G3DSA:3.40.50.10480: no description Pfam PF04427: Brix PANTHER PTHR22734:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22734: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| Brx1p | SUPERFAMILY SSF52954: Class II aaRS ABD-related |
PANTHER PTHR13634: RIBOSOME BIOGENESIS PROTEIN BRIX SMART SM00879: no description Pfam PF04427: Brix |
| Ala1p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
PRINTS PR00980: TRNASYNTHALA PANTHER PTHR11777:SF6: SUBFAMILY NOT NAMED PANTHER PTHR11777: ALANYL-TRNA SYNTHETASE TIGRFAMs TIGR00344: alaS: alanine--tRNA ligase Pfam PF01411: tRNA-synt_2c Pfam PF07973: tRNA_SAD Pfam PF02272: DHHA1 SUPERFAMILY SSF101353: Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) SUPERFAMILY SSF55186: ThrRS/AlaRS common domain SMART SM00863: Threonyl and Alanyl tRNA synthetase second a |
| Msd1p | Gene3D G3DSA:3.30.930.10: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases |
Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:3.30.1360.30: no description TIGRFAMs TIGR00459: aspS_bact: aspartate--tRNA ligase PANTHER PTHR22594:SF5: ASPARTYL-TRNA SYNTHETASE PANTHER PTHR22594: ASPARTYL/LYSYL-TRNA SYNTHETASE PRINTS PR01042: TRNASYNTHASP SUPERFAMILY SSF50249: Nucleic acid-binding proteins Pfam PF00152: tRNA-synt_2 Pfam PF01336: tRNA_anti |
| Nab3p | SUPERFAMILY SSF52954: Class II aaRS ABD-related Gene3D G3DSA:3.40.50.800: no description |
SUPERFAMILY SSF54928: RNA-binding domain, RBD SMART SM00360: RNA recognition motif Gene3D G3DSA:3.30.70.330: no description PANTHER PTHR13968:SF15: AFL070CP PANTHER PTHR13968: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Pfam PF00076: RRM_1 |
| Hts1p | Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description Pfam PF03129: HGTP_anticodon SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related |
PIR superfamily PIRSF001549: Histidyl-tRNA synthetase PANTHER PTHR11476: HISTIDYL-TRNA SYNTHETASE Pfam PF13393: tRNA-synt_His TIGRFAMs TIGR00442: hisS: histidine--tRNA ligase |
| Msf1p | SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Gene3D G3DSA:3.30.930.10: no description |
SUPERFAMILY SSF54991: Anticodon-binding domain of PheRS Pfam PF01409: tRNA-synt_2d Pfam PF03147: FDX-ACB TIGRFAMs TIGR00469: pheS_mito: phenylalanine--tRNA ligase Gene3D G3DSA:3.30.70.380: no description SMART SM00896: Ferredoxin-fold anticodon binding domain PANTHER PTHR11538:SF16: SUBFAMILY NOT NAMED PANTHER PTHR11538: PHENYLALANYL-TRNA SYNTHETASE |
| Grs2p | Pfam PF00587: tRNA-synt_2b Pfam PF03129: HGTP_anticodon Gene3D G3DSA:3.30.930.10: no description Gene3D G3DSA:3.40.50.800: no description SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases SUPERFAMILY SSF52954: Class II aaRS ABD-related |
TIGRFAMs TIGR00389: glyS_dimeric: glycine--tRNA ligase PRINTS PR01043: TRNASYNTHGLY PANTHER PTHR10745:SF0: GLYCYL-TRNA SYNTHETASE PANTHER PTHR10745: GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
This table lists domains/motifs that are unique to Yhr020wp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Yhr020wp domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Yhr020wp | ||
|---|---|---|
| Database source | Accession number | Description |
| Gene3D | G3DSA:3.30.110.30 | no description |
| Gene3D | G3DSA:3.90.960.10 | no description |
| PANTHER | PTHR11451:SF6 | PROLYL-TRNA SYNTHETASE |
| Pfam | PF09180 | ProRS-C_1 |
| SMART | SM00946 | Prolyl-tRNA synthetase, C-terminal |
| TIGRFAMs | TIGR00408 | proS_fam_I: proline--tRNA ligase |
| SUPERFAMILY | SSF55826 | YbaK/ProRS associated domain |
| SUPERFAMILY | SSF64586 | C-terminal domain of ProRS |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Yhr020wp .
