SOD2/YHR008C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Sod2p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Sod2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sod2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Sod2p
Protein	Motifs in common with Sod2p	Other motifs in this protein (but not in Sod2p )
Mrp1p	SUPERFAMILY SSF54719: Fe,Mn superoxide dismutase (SOD), C-terminal domain PANTHER PTHR11404: SUPEROXIDE DISMUTASE 2	PANTHER PTHR11404:SF2: 37S RIBOSOMAL PROTEIN MRP1, MITOCHONDRIAL
Rsm26p	Pfam PF02777: Sod_Fe_C SUPERFAMILY SSF54719: Fe,Mn superoxide dismutase (SOD), C-terminal domain SUPERFAMILY SSF46609: Fe,Mn superoxide dismutase (SOD), N-terminal domain PANTHER PTHR11404: SUPEROXIDE DISMUTASE 2	PANTHER PTHR11404:SF2: 37S RIBOSOMAL PROTEIN MRP1, MITOCHONDRIAL

Unique domains/motifs

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This table lists domains/motifs that are unique to Sod2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sod2p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Sod2p
Database source	Accession number	Description
PRINTS	PR01703	MNSODISMTASE
Gene3D	G3DSA:1.10.287.990	no description
PIR superfamily	PIRSF000349	Superoxide dismutase, Mn/Fe specific
PANTHER	PTHR11404:SF5	SUPEROXIDE DISMUTASE [MN]
Pfam	PF00081	Sod_Fe_N

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Sod2p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Sod2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Sod2p .