RIM101/YHL027W Domains/Motifs and Signal Peptides 
To directly search external databases for Rim101p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Rim101p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rim101p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Rim101p | ||
|---|---|---|
| Protein | Motifs in common with Rim101p | Other motifs in this protein (but not in Rim101p ) |
| Nrg2p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR14003: TRANSCRIPTIONAL REPRESSOR PROTEIN YY Pfam PF13465: zf-H2C2_2 |
| Rei1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR13182: ZINC FINGER PROTEIN 622 SMART SM00451: U1-like zinc finger Pfam PF12756: zf-C2H2_2 |
| Ycr087c-ap | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR13100:SF2: GB DEF: HYPOTHETICAL 17.7 KDA PROTEIN IN ABP1 5REGION PANTHER PTHR13100: FAMILY NOT NAMED Pfam PF08790: zf-LYAR |
| Prp9p | SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR12786:SF2: SPLICING FACTOR 3A PANTHER PTHR12786: SPLICING FACTOR SF3A-RELATED SMART SM00451: U1-like zinc finger Pfam PF11931: DUF3449 Pfam PF12171: zf-C2H2_jaz |
| Stp4p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR11389:SF310: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Snu23p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
Pfam PF12874: zf-met |
| Nrg1p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
Pfam PF13465: zf-H2C2_2 PANTHER PTHR11389:SF377: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Gis1p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
SMART SM00545: Small domain found in the jumonji family of SMART SM00558: A domain family that is part of the cupin me Pfam PF02373: JmjC Pfam PF02375: JmjN Pfam PF13465: zf-H2C2_2 SUPERFAMILY SSF51197: Clavaminate synthase-like PANTHER PTHR10694: JUMONJI DOMAIN CONTAINING PROTEIN |
| Swi5p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description Pfam PF00096: zf-C2H2 SMART SM00355: zinc finger |
PANTHER PTHR14596:SF6: SUBFAMILY NOT NAMED PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Adr1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389:SF376: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Met32p | Pfam PF00096: zf-C2H2 Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
Pfam PF13894: zf-C2H2_4 PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Stp1p | Pfam PF00096: zf-C2H2 SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger |
none |
| Mig3p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description Pfam PF00096: zf-C2H2 |
PANTHER PTHR11389:SF376: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Yer130cp | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger Pfam PF00096: zf-C2H2 |
PANTHER PTHR14596:SF6: SUBFAMILY NOT NAMED PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Rph1p | SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
Pfam PF02373: JmjC Pfam PF02375: JmjN Pfam PF13465: zf-H2C2_2 SMART SM00545: Small domain found in the jumonji family of SMART SM00558: A domain family that is part of the cupin me PANTHER PTHR10694:SF7: JUMONJI DOMAIN CONTAINING PROTEIN PANTHER PTHR10694: JUMONJI DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF51197: Clavaminate synthase-like |
| Mig1p | Gene3D G3DSA:3.30.160.60: no description SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger |
Pfam PF13465: zf-H2C2_2 PANTHER PTHR10042:SF12: AFR471CP PANTHER PTHR10042: EARLY GROWTH RESPONSE PROTEIN-RELATED |
| Mig2p | SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR11389:SF376: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Fzf1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389:SF377: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13894: zf-C2H2_4 Pfam PF13465: zf-H2C2_2 Pfam PF12874: zf-met |
| Rme1p | SMART SM00355: zinc finger |
Pfam PF13894: zf-C2H2_4 |
| Ygr067cp | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Pfam PF00096: zf-C2H2 Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13894: zf-C2H2_4 |
| Env11p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
Pfam PF02892: zf-BED SMART SM00614: BED zinc finger |
| Stp2p | SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Pfam PF00096: zf-C2H2 |
none |
| Zap1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 Pfam PF13894: zf-C2H2_4 |
| Rsf2p | SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description |
Pfam PF04082: Fungal_trans Pfam PF13465: zf-H2C2_2 PANTHER PTHR11389:SF376: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Msn4p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description Pfam PF00096: zf-C2H2 |
PANTHER PTHR14596:SF6: SUBFAMILY NOT NAMED PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Bud20p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR20863:SF2: ZINC FINGER PROTEIN 593-RELATED PANTHER PTHR20863: ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED SMART SM00451: U1-like zinc finger Pfam PF12171: zf-C2H2_jaz |
| Ace2p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description Pfam PF00096: zf-C2H2 |
PANTHER PTHR14596:SF6: SUBFAMILY NOT NAMED PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Yhc1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
SMART SM00451: U1-like zinc finger Pfam PF06220: zf-U1 |
| Stp3p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389:SF310: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Sfp1p | SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR23057: JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| Tda9p | SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389:SF376: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Msn2p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Mot3p | Pfam PF00096: zf-C2H2 SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR14596:SF6: SUBFAMILY NOT NAMED PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Rgm1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers PANTHER PTHR23223: KRUEPPEL C2H2-TYPE ZINC-FINGER Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger |
PANTHER PTHR23223:SF76: PROTEIN F45H11.1A, PARTIALLY CONFIRMED BY TRANSCRIPT EVIDENCE Pfam PF13465: zf-H2C2_2 |
| Crz1p | Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Jjj1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger |
PRINTS PR00625: JDOMAIN SUPERFAMILY SSF46565: Chaperone J-domain Pfam PF00226: DnaJ Pfam PF12171: zf-C2H2_jaz Pfam PF12756: zf-C2H2_2 PANTHER PTHR24078:SF9: DNAJ HOMOLOG SUBFAMILY C MEMBER 21 PANTHER PTHR24078: DNAJ HOMOLOG SUBFAMILY C MEMBER SMART SM00271: DnaJ molecular chaperone homology domain Gene3D G3DSA:1.10.287.110: no description |
| Rts2p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
SMART SM00451: U1-like zinc finger Pfam PF10357: Kin17_mid Pfam PF12171: zf-C2H2_jaz PANTHER PTHR12805: KIN17 (KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG) |
| Azf1p | SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR11389:SF377: ZINC FINGER PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13465: zf-H2C2_2 |
| Met31p | SMART SM00355: zinc finger Pfam PF00096: zf-C2H2 Gene3D G3DSA:3.30.160.60: no description SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR11389: ZINC FINGER PROTEIN |
| Usv1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers Gene3D G3DSA:3.30.160.60: no description PANTHER PTHR23223: KRUEPPEL C2H2-TYPE ZINC-FINGER SMART SM00355: zinc finger |
PANTHER PTHR23223:SF76: PROTEIN F45H11.1A, PARTIALLY CONFIRMED BY TRANSCRIPT EVIDENCE Pfam PF13465: zf-H2C2_2 |
| Cmr3p | Pfam PF00096: zf-C2H2 SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description |
PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Ypr015cp | Pfam PF00096: zf-C2H2 Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR14596: ZINC FINGER PROTEIN |
| Ypr022cp | PANTHER PTHR23223: KRUEPPEL C2H2-TYPE ZINC-FINGER Gene3D G3DSA:3.30.160.60: no description SMART SM00355: zinc finger SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers |
PANTHER PTHR23223:SF73: PREDICTED: SIMILAR TO ZINC FINGER PROTEIN 534 Pfam PF04082: Fungal_trans Pfam PF13894: zf-C2H2_4 |
| Pzf1p | SUPERFAMILY SSF57667: C2H2 and C2HC zinc fingers SMART SM00355: zinc finger Gene3D G3DSA:3.30.160.60: no description Pfam PF00096: zf-C2H2 |
PANTHER PTHR11389:SF381: ZINC FINGER, C2H2 TYPE FAMILY PROTEIN PANTHER PTHR11389: ZINC FINGER PROTEIN Pfam PF13894: zf-C2H2_4 Pfam PF13465: zf-H2C2_2 |
This table lists domains/motifs that are unique to Rim101p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rim101p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Rim101p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR23223:SF75 | PROTEIN F53F8.1, PARTIALLY CONFIRMED BY TRANSCRIPT EVIDENCE |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Rim101p .
