SPT15/YER148W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Spt15p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Spt15p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Spt15p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Spt15p
Protein	Motifs in common with Spt15p	Other motifs in this protein (but not in Spt15p )
Ogg1p	SUPERFAMILY SSF55945: TATA-box binding protein-like	TIGRFAMs TIGR00588: ogg: 8-oxoguanine DNA-glycosylase (ogg) SUPERFAMILY SSF48150: DNA-glycosylase PANTHER PTHR10242:SF0: N-GLYCOSYLASE/DNA LYASE PANTHER PTHR10242: N-GLYCOSYLASE/DNA LYASE Gene3D G3DSA:3.30.310.40: no description Gene3D G3DSA:1.10.340.30: no description Gene3D G3DSA:1.10.1670.10: no description SMART SM00478: endonuclease III Pfam PF00730: HhH-GPD Pfam PF07934: OGG_N

Unique domains/motifs

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This table lists domains/motifs that are unique to Spt15p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Spt15p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Spt15p
Database source	Accession number	Description
PRINTS	PR00686	TIFACTORIID
Gene3D	G3DSA:3.30.310.10	no description
PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN
Pfam	PF00352	TBP

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Spt15p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Spt15p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Spt15p .