RSP5/YER125W Domains/Motifs and Signal Peptides 
To directly search external databases for Rsp5p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Rsp5p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rsp5p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Rsp5p | ||
|---|---|---|
| Protein | Motifs in common with Rsp5p | Other motifs in this protein (but not in Rsp5p ) |
| Pkc1p | Pfam PF00168: C2 SMART SM00239: Protein kinase C conserved region Gene3D G3DSA:2.60.40.150: no description SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) |
Pfam PF00069: Pkinase Pfam PF02185: HR1 Pfam PF00130: C1_1 Pfam PF00433: Pkinase_C SMART SM00742: Rho effector or protein kinase C-related kin SMART SM00109: Protein kinase C conserved region 1 (C1) dom SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain SMART SM00133: Extension to Ser/Thr-type protein kinases Gene3D G3DSA:3.30.60.20: no description Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF57889: Cysteine-rich domain SUPERFAMILY SSF46585: HR1 repeat PANTHER PTHR24357:SF0: PROTEIN KINASE C PANTHER PTHR24357: PROTEIN KINASE C |
| Tom1p | Gene3D G3DSA:3.30.2160.10: no description SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Pfam PF00632: HECT SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain |
PANTHER PTHR11254:SF131: SUBFAMILY NOT NAMED Pfam PF06012: DUF908 Pfam PF06025: DUF913 Pfam PF14377: DUF4414 SUPERFAMILY SSF48371: ARM repeat |
| Brr2p | Gene3D G3DSA:2.60.40.150: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases Pfam PF02889: Sec63 Pfam PF00270: DEAD Pfam PF00271: Helicase_C Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:1.10.3380.10: no description Gene3D G3DSA:1.10.150.20: no description PANTHER PTHR11752:SF7: U520 PANTHER PTHR11752: HELICASE SKI2W SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain SMART SM00611: Domain of unknown function in Sec63p, Brr2p SMART SM00973: Sec63 Brl domain |
| Wwm1p | SMART SM00456: Domain with 2 conserved Trp (W) residues Pfam PF00397: WW SUPERFAMILY SSF51045: WW domain Gene3D G3DSA:2.20.70.10: no description |
none |
| Hul5p | Pfam PF00632: HECT SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain Gene3D G3DSA:3.30.2160.10: no description SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
PANTHER PTHR11254:SF70: PROBABLE UBIQUITIN--PROTEIN LIGASE HUL5(YEAST)-RELATED |
| Psd2p | Pfam PF00168: C2 SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region |
Pfam PF02666: PS_Dcarbxylase PANTHER PTHR10067:SF0: PHOSPHATIDYLSERINE DECARBOXYLASE PANTHER PTHR10067: PHOSPHATIDYLSERINE DECARBOXYLASE TIGRFAMs TIGR00163: PS_decarb: phosphatidylserine decarboxylase |
| Slh1p | Gene3D G3DSA:2.60.40.150: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases PANTHER PTHR11752:SF8: ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3, HELC1 PANTHER PTHR11752: HELICASE SKI2W Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:1.10.3380.10: no description Pfam PF02889: Sec63 Pfam PF00270: DEAD Pfam PF00271: Helicase_C SMART SM00487: DEAD-like helicases superfamily SMART SM00382: ATPases associated with a variety of cellula SMART SM00490: helicase superfamily c-terminal domain SMART SM00611: Domain of unknown function in Sec63p, Brr2p SMART SM00973: Sec63 Brl domain |
| Sch9p | SMART SM00239: Protein kinase C conserved region Gene3D G3DSA:2.60.40.150: no description Pfam PF00168: C2 SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) |
SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00219: Tyrosine kinase, catalytic domain SMART SM00133: Extension to Ser/Thr-type protein kinases Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description Pfam PF00069: Pkinase Pfam PF00433: Pkinase_C PANTHER PTHR24352:SF19: SERINE/THREONINE-PROTEIN KINASE SCH9 PANTHER PTHR24352: AKT-RELATED SERINE/THREONINE-PROTEIN KINASE SUPERFAMILY SSF56112: Protein kinase-like (PK-like) |
| Set2p | SUPERFAMILY SSF51045: WW domain SMART SM00456: Domain with 2 conserved Trp (W) residues |
SUPERFAMILY SSF82199: SET domain Pfam PF08236: SRI Pfam PF00856: SET SMART SM00570: associated with SET domains SMART SM00317: SET (Su(var)3-9, Enhancer-of-zeste, Trithora SMART SM00508: Cysteine-rich motif following a subset of SE Gene3D G3DSA:2.170.270.10: no description PANTHER PTHR22884:SF36: HUNTINGTIN INTERACTING PROTEIN 1 PANTHER PTHR22884: SET DOMAIN PROTEINS |
| Ess1p | Gene3D G3DSA:2.20.70.10: no description SMART SM00456: Domain with 2 conserved Trp (W) residues SUPERFAMILY SSF51045: WW domain Pfam PF00397: WW |
PANTHER PTHR10657:SF4: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 (ROTAMASE PIN1)(PPIASE PIN1) PANTHER PTHR10657: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Gene3D G3DSA:3.10.50.40: no description SUPERFAMILY SSF54534: FKBP-like Pfam PF00639: Rotamase |
| Hul4p | SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain Pfam PF00632: HECT Gene3D G3DSA:3.30.2160.10: no description PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
PANTHER PTHR11254:SF110: SUBFAMILY NOT NAMED |
| Ufd4p | PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus Pfam PF00632: HECT Gene3D G3DSA:3.30.2160.10: no description SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain |
PANTHER PTHR11254:SF74: UBIQUITIN FUSION DEGRADATION PROTEIN 4 Gene3D G3DSA:1.25.10.10: no description SUPERFAMILY SSF48371: ARM repeat |
| Prp40p | SUPERFAMILY SSF51045: WW domain SMART SM00456: Domain with 2 conserved Trp (W) residues Pfam PF00397: WW Gene3D G3DSA:2.20.70.10: no description |
SUPERFAMILY SSF81698: FF domain SMART SM00441: Contains two conserved F residues PANTHER PTHR11864: PRE-MRNA-PROCESSING PROTEIN PRP40 Pfam PF01846: FF Gene3D G3DSA:1.10.10.440: no description |
| Bud2p | Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region Pfam PF00168: C2 |
SUPERFAMILY SSF48350: GTPase activation domain, GAP Gene3D G3DSA:1.10.506.10: no description SMART SM00323: GTPase-activator protein for Ras-like GTPase Pfam PF00616: RasGAP PANTHER PTHR10194:SF24: RAS GTPASE ACTIVATING PROTEIN-RELATED PANTHER PTHR10194: RAS GTPASE-ACTIVATING PROTEINS |
| Vps34p | SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description |
SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF48371: ARM repeat Pfam PF00613: PI3Ka Pfam PF00454: PI3_PI4_kinase Pfam PF00792: PI3K_C2 PANTHER PTHR10048:SF7: PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3 PANTHER PTHR10048: PHOSPHATIDYLINOSITOL KINASE PIR superfamily PIRSF000587: Phosphatidylinositol 3-kinase, Vps34 type Gene3D G3DSA:1.25.40.70: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description SMART SM00142: Phosphoinositide 3-kinase, region postulated SMART SM00145: Phosphoinositide 3-kinase family, accessory SMART SM00146: Phosphoinositide 3-kinase, catalytic domain |
| Tcb3p | SMART SM00239: Protein kinase C conserved region SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description Pfam PF00168: C2 |
PIR superfamily PIRSF037232: Tricalbin PANTHER PTHR10774:SF15: TRICALBIN PANTHER PTHR10774: EXTENDED SYNAPTOTAGMIN-RELATED |
| Tcb2p | Pfam PF00168: C2 Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) |
PIR superfamily PIRSF037232: Tricalbin PANTHER PTHR10774:SF15: TRICALBIN PANTHER PTHR10774: EXTENDED SYNAPTOTAGMIN-RELATED PRINTS PR00360: C2DOMAIN |
| Inn1p | SMART SM00239: Protein kinase C conserved region Gene3D G3DSA:2.60.40.150: no description Pfam PF00168: C2 SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) |
none |
| Tcb1p | Pfam PF00168: C2 SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region |
PANTHER PTHR10774:SF15: TRICALBIN PANTHER PTHR10774: EXTENDED SYNAPTOTAGMIN-RELATED PRINTS PR00360: C2DOMAIN PIR superfamily PIRSF037232: Tricalbin |
| Sec63p | Gene3D G3DSA:2.60.40.150: no description |
SMART SM00271: DnaJ molecular chaperone homology domain SMART SM00973: Sec63 Brl domain PANTHER PTHR24075: FAMILY NOT NAMED SUPERFAMILY SSF46565: Chaperone J-domain Pfam PF02889: Sec63 Pfam PF00226: DnaJ PRINTS PR00625: JDOMAIN Gene3D G3DSA:1.10.287.110: no description |
| Yor296wp | Pfam PF00168: C2 SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region |
Pfam PF10540: Membr_traf_MHD PANTHER PTHR15015:SF2: BAI1-ASSOCIATED PROTEIN 3 PANTHER PTHR15015: MUNC13-4 PROTEIN-RELATED |
| Plc1p | SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Gene3D G3DSA:2.60.40.150: no description SMART SM00239: Protein kinase C conserved region |
Pfam PF00388: PI-PLC-X Pfam PF00387: PI-PLC-Y SUPERFAMILY SSF51695: PLC-like phosphodiesterases SUPERFAMILY SSF47473: EF-hand SUPERFAMILY SSF50729: PH domain-like PRINTS PR00390: PHPHLIPASEC Gene3D G3DSA:2.30.29.30: no description Gene3D G3DSA:1.10.238.10: no description Gene3D G3DSA:3.20.20.190: no description SMART SM00148: Phospholipase C, catalytic domain (part); do SMART SM00149: Phospholipase C, catalytic domain (part); do PANTHER PTHR10336:SF20: 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE 1 PANTHER PTHR10336: PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| Urn1p | Pfam PF00397: WW SUPERFAMILY SSF51045: WW domain Gene3D G3DSA:2.20.70.10: no description SMART SM00456: Domain with 2 conserved Trp (W) residues |
Pfam PF01846: FF SUPERFAMILY SSF81698: FF domain PANTHER PTHR11864: PRE-MRNA-PROCESSING PROTEIN PRP40 Gene3D G3DSA:1.10.10.440: no description SMART SM00441: Contains two conserved F residues |
This table lists domains/motifs that are unique to Rsp5p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rsp5p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Rsp5p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR11254:SF81 | E3 UBIQUITIN--PROTEIN LIGASE RSP5(YEAST)-RELATED |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Rsp5p .
