RPS8B/YER102W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rps8bp domain/motif information see the external links section.

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Shared domains/motifs
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This table lists proteins that share domains/motifs in common with those found in Rps8bp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rps8bp domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rps8bp
Protein Motifs in common with Rps8bp Other motifs in this protein (but not in Rps8bp )
Rps8ap PANTHER PTHR10394:SF1: 40S RIBOSOMAL PROTEIN S8
PANTHER PTHR10394: 40S RIBOSOMAL PROTEIN S8
TIGRFAMs TIGR00307: S8e: ribosomal protein S8.e
Pfam PF01201: Ribosomal_S8e
 none
Nsa2p Pfam PF01201: Ribosomal_S8e
 PANTHER PTHR12642:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12642: FAMILY NOT NAMED

Unique domains/motifs
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This table lists domains/motifs that are unique to Rps8bp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rps8bp domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rps8bp .

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rps8bp .

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rps8bp .

External Links
Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


The following external links can be used to directly search external databases for domain/motif information for Rps8bp .