RNR1/YER070W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rnr1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Rnr1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rnr1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rnr1p
Protein	Motifs in common with Rnr1p	Other motifs in this protein (but not in Rnr1p )
Rnr3p	TIGRFAMs TIGR02506: NrdE_NrdA: ribonucleoside-diphosphate reductase, a Gene3D G3DSA:3.20.70.20: no description PANTHER PTHR11573:SF6: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN PANTHER PTHR11573: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN Pfam PF02867: Ribonuc_red_lgC Pfam PF00317: Ribonuc_red_lgN Pfam PF03477: ATP-cone SUPERFAMILY SSF51998: PFL-like glycyl radical enzymes SUPERFAMILY SSF48168: R1 subunit of ribonucleotide reductase, N-terminal domain PRINTS PR01183: RIBORDTASEM1	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Rnr1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rnr1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rnr1p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rnr1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rnr1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rnr1p .