VHR2/YER064C Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vhr2p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Vhr2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vhr2p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Vhr2p
Protein Motifs in common with Vhr2p Other motifs in this protein (but not in Vhr2p )
Sla1p ProDom PD936484: Q806D4_9VIRU_Q806D4;
PRINTS PR00452: SH3DOMAIN
Pfam PF00018: SH3_1
Pfam PF03983: SHD1
Pfam PF14604: SH3_9
SMART SM00326: Src homology
Gene3D G3DSA:2.30.30.40: no description
PANTHER PTHR11216:SF6: INTERSECTIN 1-RELATED
PANTHER PTHR11216: EH DOMAIN
SUPERFAMILY SSF50044: SH3-domain
Myo1p ProDom PD936484: Q806D4_9VIRU_Q806D4;
PANTHER PTHR13140:SF23: MYOSIN HEAVY CHAIN, NONMUSCLE OR SMOOTH MUSCLE
PANTHER PTHR13140: MYOSIN
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF46579: Prefoldin
Gene3D G3DSA:3.40.50.300: no description
Gene3D G3DSA:4.10.270.10: no description
PRINTS PR00193: MYOSINHEAVY
Pfam PF00063: Myosin_head
SMART SM00242: Myosin. Large ATPases.
Vhr1p ProDom PD936484: Q806D4_9VIRU_Q806D4;
Pfam PF04001: Vhr1
none

Unique domains/motifs


This table lists domains/motifs that are unique to Vhr2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vhr2p domain/motif information see the external links section.

Last updated on 2013-12-16

There are no unique domains/motifs predicted for Vhr2p .

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Vhr2p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vhr2p .


The following external links can be used to directly search external databases for domain/motif information for Vhr2p .