ISC1/YER019W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Isc1p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Isc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Isc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Isc1p
Protein	Motifs in common with Isc1p	Other motifs in this protein (but not in Isc1p )
Ccr4p	Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description	Pfam PF12799: LRR_4 PANTHER PTHR12121:SF13: CARBON CATABOLITE REPRESSOR PROTEIN 4 PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4 SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description SMART SM00369: Leucine-rich repeats, typical (most populate
Apn2p	Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like Pfam PF03372: Exo_endo_phos	PANTHER PTHR22748:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22748: AP ENDONUCLEASE Pfam PF06839: zf-GRF
Cwh43p	SUPERFAMILY SSF56219: DNase I-like Pfam PF03372: Exo_endo_phos	PANTHER PTHR14859:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14859: CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Pfam PF10277: Frag1
Inp51p	Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description	PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE SMART SM00128: Inositol polyphosphate phosphatase, catalyti Pfam PF02383: Syja_N
Ngl3p	SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description Pfam PF03372: Exo_endo_phos	PANTHER PTHR12121:SF5: NOCTURNIN-RELATED PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4
Ngl2p	Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like	PANTHER PTHR12121:SF5: NOCTURNIN-RELATED PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4
Inp52p	Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like	Pfam PF02383: Syja_N SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE
Ngl1p	Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description	PANTHER PTHR12121:SF11: GLUCOSE-REPRESSIBLE ALCOHOL DEHYDROGENASE TRANSCRIPTIONAL EFFECTOR PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4
Inp54p	Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like	SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF16: GB DEF: S.CEREVISIAE CHROMOSOME XV READING FRAME ORF YOL065C PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE
Inp53p	Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description	SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE Pfam PF02383: Syja_N

Unique domains/motifs

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This table lists domains/motifs that are unique to Isc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Isc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Isc1p
Database source	Accession number	Description
PANTHER	PTHR12393	SPHINGOMYELIN PHOSPHODIESTERASE RELATED
PANTHER	PTHR12393:SF0	SUBFAMILY NOT NAMED

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	393 - 415
	425 - 447

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Isc1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Isc1p .