RPL12A/YEL054C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl12ap domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Rpl12ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl12ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl12ap
Protein	Motifs in common with Rpl12ap	Other motifs in this protein (but not in Rpl12ap )
Rpl12bp	Gene3D G3DSA:3.30.1550.10: no description Gene3D G3DSA:1.10.10.250: no description Pfam PF03946: Ribosomal_L11_N Pfam PF00298: Ribosomal_L11 SMART SM00649: Ribosomal protein L11/L12 SUPERFAMILY SSF54747: Ribosomal L11/L12e N-terminal domain SUPERFAMILY SSF46906: Ribosomal protein L11, C-terminal domain PANTHER PTHR11661: 60S RIBOSOMAL PROTEIN L12	none
Mrpl19p	PANTHER PTHR11661: 60S RIBOSOMAL PROTEIN L12 SMART SM00649: Ribosomal protein L11/L12 Gene3D G3DSA:3.30.1550.10: no description Gene3D G3DSA:1.10.10.250: no description SUPERFAMILY SSF54747: Ribosomal L11/L12e N-terminal domain SUPERFAMILY SSF46906: Ribosomal protein L11, C-terminal domain Pfam PF00298: Ribosomal_L11 Pfam PF03946: Ribosomal_L11_N	TIGRFAMs TIGR01632: L11_bact: ribosomal protein L11 ProDom PD001367: RM19_YEAST_P53875;

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Rpl12ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl12ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rpl12ap .

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl12ap .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl12ap .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl12ap .