GLY1/YEL046C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Gly1p domain/motif information see the external links section.

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Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Gly1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gly1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Gly1p
Protein	Motifs in common with Gly1p	Other motifs in this protein (but not in Gly1p )
Cys3p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	PIR superfamily PIRSF001434: Cystathionine gamma-synthase Pfam PF01053: Cys_Met_Meta_PP PANTHER PTHR11808:SF15: CYSTATHIONINE GAMMA-LYASE (GAMMA-CYSTATHIONASE) PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER
Shm1p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11680:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11680: SERINE HYDROXYMETHYLTRANSFERASE PIR superfamily PIRSF000412: Serine/glycine hydroxymethyltransferase Pfam PF00464: SHMT
Nfs1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00266: Aminotran_5 TIGRFAMs TIGR02006: IscS: cysteine desulfurase IscS PANTHER PTHR11601:SF13: SUBFAMILY NOT NAMED PANTHER PTHR11601: CYSTEINE DESULFURYLASE
Lcb2p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR13693:SF3: SERINE PALMITOYLTRANSFERASE 2 PANTHER PTHR13693: CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE Pfam PF00155: Aminotran_1_2
Alt2p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11751:SF29: ALANINE AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
Hem1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00155: Aminotran_1_2 TIGRFAMs TIGR01821: 5aminolev_synth: 5-aminolevulinic acid synthase PANTHER PTHR13693:SF7: 5-AMINOLEVULINIC ACID SYNTHASE PANTHER PTHR13693: CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Dpl1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description	Pfam PF00282: Pyridoxal_deC PANTHER PTHR11999:SF5: SPHINGOSINE PHOSPHATE LYASE PANTHER PTHR11999: GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Yer152cp	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11751:SF12: AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
Agx1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	PANTHER PTHR21152:SF7: SUBFAMILY NOT NAMED PANTHER PTHR21152: AMINOTRANSFERASE CLASS V Pfam PF00266: Aminotran_5
Irc7p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	TIGRFAMs TIGR01324: cysta_beta_ly_B: cystathionine beta-lyase PIR superfamily PIRSF001434: Cystathionine gamma-synthase Pfam PF01053: Cys_Met_Meta_PP PANTHER PTHR11808:SF8: CYSTATHIONINE BETA-LYASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER
Str3p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF01053: Cys_Met_Meta_PP TIGRFAMs TIGR01329: cysta_beta_ly_E: cystathionine beta-lyase PIR superfamily PIRSF001434: Cystathionine gamma-synthase PANTHER PTHR11808:SF18: CYSTATHIONINE BETA-LYASE (BETA-CYSTATHIONASE) PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER
Aro8p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11751:SF15: L-KYNURENINE/ALPHA-AMINOADIPATE AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
Uga1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.90.1150.10: no description Gene3D G3DSA:3.40.640.10: no description	Pfam PF00202: Aminotran_3 TIGRFAMs TIGR00699: GABAtrns_euk: 4-aminobutyrate aminotransferase PANTHER PTHR11986:SF6: 4-AMINOBUTYRATE AMINOTRANSFERASE PANTHER PTHR11986: AMINOTRANSFERASE CLASS III
Yhr112cp	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11808:SF6: CYSTATHIONINE GAMMA-SYNTHASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER PIR superfamily PIRSF001434: Cystathionine gamma-synthase Pfam PF01053: Cys_Met_Meta_PP
Aro9p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	PANTHER PTHR11751:SF15: L-KYNURENINE/ALPHA-AMINOADIPATE AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
His5p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	PANTHER PTHR11751:SF3: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED TIGRFAMs TIGR01141: hisC: histidinol-phosphate transaminase Pfam PF00155: Aminotran_1_2
Bna3p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11751:SF39: AMINOTRANSFERASE RELATED PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
Str2p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF01053: Cys_Met_Meta_PP PANTHER PTHR11808:SF5: CYSTATHIONINE GAMMA-SYNTHASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER
Aat1p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11879:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11879: ASPARTATE AMINOTRANSFERASE PRINTS PR00799: TRANSAMINASE Pfam PF00155: Aminotran_1_2
Yll058wp	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	PANTHER PTHR11808:SF5: CYSTATHIONINE GAMMA-SYNTHASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER Pfam PF01053: Cys_Met_Meta_PP
Aat2p	Gene3D G3DSA:3.40.640.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	Pfam PF00155: Aminotran_1_2 PRINTS PR00799: TRANSAMINASE PANTHER PTHR11879:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11879: ASPARTATE AMINOTRANSFERASE
Shm2p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00464: SHMT PIR superfamily PIRSF000412: Serine/glycine hydroxymethyltransferase PANTHER PTHR11680:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11680: SERINE HYDROXYMETHYLTRANSFERASE
Alt1p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11751:SF29: ALANINE AMINOTRANSFERASE PANTHER PTHR11751: SUBGROUP I AMINOTRANSFERASE RELATED Pfam PF00155: Aminotran_1_2
Bna5p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00266: Aminotran_5 TIGRFAMs TIGR01814: kynureninase: kynureninase PANTHER PTHR14084: KYNURENINASE
Met17p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PIR superfamily PIRSF001434: Cystathionine gamma-synthase PANTHER PTHR11808:SF12: O-ACETYLHOMOSERINE (THIOL)-LYASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER TIGRFAMs TIGR01326: OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypro Pfam PF01053: Cys_Met_Meta_PP
Car2p	Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	TIGRFAMs TIGR01885: Orn_aminotrans: ornithine--oxo-acid transaminase Pfam PF00202: Aminotran_3 PANTHER PTHR11986:SF18: ORNITHINE AMINOTRANSFERASE PANTHER PTHR11986: AMINOTRANSFERASE CLASS III
Yml082wp	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF01053: Cys_Met_Meta_PP PANTHER PTHR11808:SF5: CYSTATHIONINE GAMMA-SYNTHASE PANTHER PTHR11808: TRANS-SULFURATION ENZYME FAMILY MEMBER
Gcv2p	Gene3D G3DSA:3.40.640.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	PANTHER PTHR11773:SF0: GLYCINE DEHYDROGENASE PANTHER PTHR11773: GLYCINE DEHYDROGENASE TIGRFAMs TIGR00461: gcvP: glycine dehydrogenase Pfam PF02347: GDC-P
Gad1p	Gene3D G3DSA:3.40.640.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	TIGRFAMs TIGR01788: Glu-decarb-GAD: glutamate decarboxylase PANTHER PTHR11999:SF1: GLUTAMATE DECARBOXYLASE PANTHER PTHR11999: GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Pfam PF00282: Pyridoxal_deC
Lcb1p	Gene3D G3DSA:3.40.640.10: no description SUPERFAMILY SSF53383: PLP-dependent transferases	Pfam PF00155: Aminotran_1_2 PANTHER PTHR13693:SF2: SERINE PALMITOYLTRANSFERASE I PANTHER PTHR13693: CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Bio3p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.90.1150.10: no description Gene3D G3DSA:3.40.640.10: no description	PANTHER PTHR11986:SF37: SUBFAMILY NOT NAMED PANTHER PTHR11986: AMINOTRANSFERASE CLASS III Pfam PF00202: Aminotran_3 TIGRFAMs TIGR00508: bioA: adenosylmethionine-8-amino-7-oxononanoate tr
Arg8p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00202: Aminotran_3 PANTHER PTHR11986:SF19: ACETYLORNITHINE AMINOTRANSFERASE PANTHER PTHR11986: AMINOTRANSFERASE CLASS III TIGRFAMs TIGR00707: argD: transaminase, acetylornithine/succinylornith
Ser1p	SUPERFAMILY SSF53383: PLP-dependent transferases Gene3D G3DSA:3.40.640.10: no description Gene3D G3DSA:3.90.1150.10: no description	Pfam PF00266: Aminotran_5 PANTHER PTHR21152:SF1: PHOSPHOSERINE AMINOTRANSFERASE PANTHER PTHR21152: AMINOTRANSFERASE CLASS V PIR superfamily PIRSF000525: Phosphoserine aminotransferase TIGRFAMs TIGR01364: serC_1: phosphoserine transaminase

Unique domains/motifs

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This table lists domains/motifs that are unique to Gly1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Gly1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Gly1p
Database source	Accession number	Description
PANTHER	PTHR10289	THREONINE ALDOLASE
PANTHER	PTHR10289:SF0	THREONINE ALDOLASE
Pfam	PF01212	Beta_elim_lyase

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Gly1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Gly1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Gly1p .