EDC3/YEL015W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Edc3p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Edc3p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Edc3p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Edc3p
Protein	Motifs in common with Edc3p	Other motifs in this protein (but not in Edc3p )
Ynl200cp	Gene3D G3DSA:3.40.50.10260: no description SUPERFAMILY SSF64153: YjeF N-terminal domain-like Pfam PF03853: YjeF_N	PANTHER PTHR13232:SF5: N-TERMINAL YJEF RELATED PANTHER PTHR13232: N-TERMINAL YJEF RELATED TIGRFAMs TIGR00197: yjeF_nterm: YjeF family N-terminal domain
Scd6p	Pfam PF09532: FDF	Pfam PF12701: LSM14 SUPERFAMILY SSF50182: Sm-like ribonucleoproteins PANTHER PTHR13586: SCD6 PROTEIN-RELATED

Unique domains/motifs

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This table lists domains/motifs that are unique to Edc3p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Edc3p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Edc3p
Database source	Accession number	Description
PANTHER	PTHR13612	UNCHARACTERIZED
PANTHER	PTHR13612:SF0	SUBFAMILY NOT NAMED

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Edc3p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Edc3p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Edc3p .