SNT1/YCR033W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Snt1p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Snt1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Snt1p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Snt1p
Protein Motifs in common with Snt1p Other motifs in this protein (but not in Snt1p )
Fun19p SUPERFAMILY SSF46689: Homeodomain-like
PANTHER PTHR12374: TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED
Pfam PF04433: SWIRM
Tod6p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF13921: Myb_DNA-bind_6
Reb1p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
PANTHER PTHR10641:SF193: SUBFAMILY NOT NAMED
PANTHER PTHR10641: MYB-LIKE DNA-BINDING PROTEIN MYB
Pfam PF13921: Myb_DNA-bind_6
Pyc2p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF51569: Aldolase
SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like
SUPERFAMILY SSF89000: post-HMGL domain-like
SUPERFAMILY SSF52440: PreATP-grasp domain
SUPERFAMILY SSF51246: Rudiment single hybrid motif
SUPERFAMILY SSF51230: Single hybrid motif
SMART SM00878: Biotin carboxylase C-terminal domain
Gene3D G3DSA:3.40.50.20: no description
Gene3D G3DSA:3.30.1490.20: no description
Gene3D G3DSA:3.30.470.20: no description
Gene3D G3DSA:3.20.20.70: no description
Gene3D G3DSA:3.10.600.10: no description
Gene3D G3DSA:2.40.50.100: no description
Pfam PF02786: CPSase_L_D2
Pfam PF02436: PYC_OADA
Pfam PF00289: CPSase_L_chain
Pfam PF02785: Biotin_carb_C
Pfam PF00682: HMGL-like
Pfam PF00364: Biotin_lipoyl
TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase
PIR superfamily PIRSF001594: Pyruvate carboxylase
PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE
PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE
Isw1p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
SMART SM00487: DEAD-like helicases superfamily
SMART SM00490: helicase superfamily c-terminal domain
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF101224: HAND domain of the nucleosome remodeling ATPase ISWI
Gene3D G3DSA:3.40.50.300: no description
PANTHER PTHR10799:SF73: ISWI CHROMATIN-REMODELING COMPLEX ATPASE ISW1
PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED
Pfam PF00176: SNF2_N
Pfam PF09111: SLIDE
Pfam PF09110: HAND
Pfam PF00271: Helicase_C
Hmlalpha2p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
Pfam PF00046: Homeobox
SMART SM00389: Homeodomain
Matalpha2p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF00046: Homeobox
SMART SM00389: Homeodomain
Srb8p PANTHER PTHR22795: SUPPRESSOR OF RNA POLYMERASE B SRB8-RELATED
Pfam PF09497: Med12
PANTHER PTHR22795:SF10: SUPPRESSOR OF RNA POLYMERASE B SRB8
Hmra2p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
SMART SM00389: Homeodomain
Pfam PF00046: Homeobox
Hmra1p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
Pfam PF00046: Homeobox
Gene3D G3DSA:3.40.50.10760: no description
PANTHER PTHR24325: FAMILY NOT NAMED
SMART SM00389: Homeodomain
Pho2p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00389: Homeodomain
Pfam PF00046: Homeobox
PANTHER PTHR24326:SF62: SUBFAMILY NOT NAMED
PANTHER PTHR24326: FAMILY NOT NAMED
Nsi1p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Pfam PF13921: Myb_DNA-bind_6
PANTHER PTHR10641:SF193: SUBFAMILY NOT NAMED
PANTHER PTHR10641: MYB-LIKE DNA-BINDING PROTEIN MYB
Pdc2p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
PANTHER PTHR19303:SF9: PDC2 PROTEIN
PANTHER PTHR19303: TRANSPOSON
Pfam PF03184: DDE_1
Pfam PF03221: HTH_Tnp_Tc5
SMART SM00674: Putative DNA-binding domain in centromere pr
Eaf1p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00573: domain in helicases and associated with SANT
Pfam PF07529: HSA
Pfam PF13921: Myb_DNA-bind_6
Ada2p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF00249: Myb_DNA-binding
Gene3D G3DSA:1.10.10.60: no description
PIR superfamily PIRSF025024: Transcriptional adaptor 2
SMART SM00291: Zinc-binding domain, present in Dystrophin,
PANTHER PTHR12374:SF1: TRANSCRIPTIONAL ADAPTOR 2 (ADA2)
PANTHER PTHR12374: TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED
Pfam PF00569: ZZ
Pfam PF04433: SWIRM
Yhp1p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00389: Homeodomain
Pfam PF00046: Homeobox
Dot6p Gene3D G3DSA:1.10.10.60: no description
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF13921: Myb_DNA-bind_6
Chd1p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:2.40.50.40: no description
Gene3D G3DSA:3.40.50.300: no description
Pfam PF00176: SNF2_N
Pfam PF13907: DUF4208
Pfam PF00385: Chromo
Pfam PF00271: Helicase_C
SMART SM00298: Chromatin organization modifier domain
SMART SM00487: DEAD-like helicases superfamily
SMART SM00490: helicase superfamily c-terminal domain
PANTHER PTHR10799:SF70: CHROMODOMAIN HELICASE DNA BINDING PROTEIN
PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF54160: Chromo domain-like
Rsc8p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF00249: Myb_DNA-binding
Gene3D G3DSA:1.10.10.60: no description
PANTHER PTHR12802:SF6: CHROMATIN STRUCTURE REMODELING COMPLEX PROTEIN
PANTHER PTHR12802: SWI/SNF COMPLEX-RELATED
SMART SM00291: Zinc-binding domain, present in Dystrophin,
Pfam PF04433: SWIRM
Pfam PF00569: ZZ
Gene3D G3DSA:1.10.10.10: no description
Pyc1p Gene3D G3DSA:1.10.10.60: no description
Gene3D G3DSA:3.40.50.20: no description
Gene3D G3DSA:3.30.1490.20: no description
Gene3D G3DSA:3.30.470.20: no description
Gene3D G3DSA:3.20.20.70: no description
Gene3D G3DSA:3.10.600.10: no description
Gene3D G3DSA:2.40.50.100: no description
TIGRFAMs TIGR01235: pyruv_carbox: pyruvate carboxylase
SMART SM00878: Biotin carboxylase C-terminal domain
PANTHER PTHR18866:SF10: PYRUVATE CARBOXYLASE
PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE
PIR superfamily PIRSF001594: Pyruvate carboxylase
SUPERFAMILY SSF51569: Aldolase
SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like
SUPERFAMILY SSF89000: post-HMGL domain-like
SUPERFAMILY SSF52440: PreATP-grasp domain
SUPERFAMILY SSF51246: Rudiment single hybrid motif
SUPERFAMILY SSF51230: Single hybrid motif
Pfam PF02786: CPSase_L_D2
Pfam PF02436: PYC_OADA
Pfam PF00289: CPSase_L_chain
Pfam PF02785: Biotin_carb_C
Pfam PF00682: HMGL-like
Pfam PF00364: Biotin_lipoyl
Tos8p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
SMART SM00389: Homeodomain
PANTHER PTHR11850: HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Pfam PF05920: Homeobox_KN
Snt2p SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF57903: FYVE/PHD zinc finger
SUPERFAMILY SSF57783: Zinc beta-ribbon
Gene3D G3DSA:3.30.40.10: no description
Pfam PF01426: BAH
Pfam PF00628: PHD
Pfam PF13832: zf-HC5HC2H_2
PANTHER PTHR13793:SF12: PHD FINGER PROTEIN
PANTHER PTHR13793: PHD FINGER PROTEINS
SMART SM00439: Bromo adjacent homology domain
SMART SM00249: PHD zinc finger
Swc4p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
PANTHER PTHR12855:SF2: GB DEF: HYPOTHETICAL 55.2 KDA PROTEIN IN ERP6-TFG2 INTERGENIC REGION
PANTHER PTHR12855: FAMILY NOT NAMED
Swi3p Pfam PF00249: Myb_DNA-binding
Gene3D G3DSA:1.10.10.60: no description
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF04433: SWIRM
Gene3D G3DSA:1.10.10.10: no description
PANTHER PTHR12802:SF5: SWI/SNF COMPLEX COMPONENT SWI3
PANTHER PTHR12802: SWI/SNF COMPLEX-RELATED
Bas1p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Gene3D G3DSA:1.10.10.60: no description
Pfam PF00249: Myb_DNA-binding
SUPERFAMILY SSF46689: Homeodomain-like
PANTHER PTHR10641:SF167: SUBFAMILY NOT NAMED
PANTHER PTHR10641: MYB-LIKE DNA-BINDING PROTEIN MYB
Pfam PF13921: Myb_DNA-bind_6
Yox1p SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
Pfam PF00046: Homeobox
SMART SM00389: Homeodomain
Cef1p SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:1.10.10.60: no description
Pfam PF13921: Myb_DNA-bind_6
Pfam PF11831: Myb_Cef
PANTHER PTHR10641:SF17: CELL DIVISION CYCLE 5-LIKE PROTEIN
PANTHER PTHR10641: MYB-LIKE DNA-BINDING PROTEIN MYB
Tri1p Gene3D G3DSA:1.10.10.60: no description
Gene3D G3DSA:1.10.245.10: no description
SMART SM00151: SWI complex, BAF60b domains
Pfam PF02201: SWIB
Pfam PF08766: DEK_C
SUPERFAMILY SSF47592: SWIB/MDM2 domain
PANTHER PTHR13844:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR13844: BRG-1 ASSOCIATED FACTOR 60 (BAF60)
Bdp1p SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF00249: Myb_DNA-binding
Gene3D G3DSA:1.10.10.60: no description
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
PIR superfamily PIRSF037327: Transcription factor IIIB, Bdp1 subunit, fungal type
PANTHER PTHR22929:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR22929: RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B
Rap1p Gene3D G3DSA:1.10.10.60: no description
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Pfam PF00249: Myb_DNA-binding
Gene3D G3DSA:3.40.50.10190: no description
SMART SM00292: breast cancer carboxy-terminal domain
SUPERFAMILY SSF52113: BRCT domain
Pfam PF09197: Rap1-DNA-bind
Pfam PF11626: Rap1_C
Rpb10p Gene3D G3DSA:1.10.10.60: no description
Pfam PF01194: RNA_pol_N
ProDom PD006539: RPB10_YEAST_P22139;
PANTHER PTHR23413: 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
SUPERFAMILY SSF46924: RNA polymerase subunit RPB10
PIR superfamily PIRSF005653: DNA-directed RNA polymerase II, RPB10/RpoN subunit type
Uaf30p Gene3D G3DSA:1.10.10.60: no description
PANTHER PTHR13844:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR13844: BRG-1 ASSOCIATED FACTOR 60 (BAF60)
Gene3D G3DSA:1.10.245.10: no description
SUPERFAMILY SSF47592: SWIB/MDM2 domain
Pfam PF02201: SWIB
Pfam PF08766: DEK_C
SMART SM00151: SWI complex, BAF60b domains
Isw2p Gene3D G3DSA:1.10.10.60: no description
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:3.40.50.300: no description
SMART SM00487: DEAD-like helicases superfamily
SMART SM00490: helicase superfamily c-terminal domain
Pfam PF00176: SNF2_N
Pfam PF09111: SLIDE
Pfam PF09110: HAND
Pfam PF00271: Helicase_C
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF101224: HAND domain of the nucleosome remodeling ATPase ISWI
PANTHER PTHR10799:SF73: ISWI CHROMATIN-REMODELING COMPLEX ATPASE ISW1
PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED
Yor338wp SUPERFAMILY SSF46689: Homeodomain-like
PANTHER PTHR12374: TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED
Pfam PF04433: SWIRM
Tbf1p Pfam PF00249: Myb_DNA-binding
SUPERFAMILY SSF46689: Homeodomain-like
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Gene3D G3DSA:1.10.10.60: no description
PANTHER PTHR32197:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR32197: FAMILY NOT NAMED
Pfam PF08558: TRF
Cup9p Gene3D G3DSA:1.10.10.60: no description
SUPERFAMILY SSF46689: Homeodomain-like
PANTHER PTHR11850:SF31: HOMEOBOX PROTEIN CUP9
PANTHER PTHR11850: HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Pfam PF05920: Homeobox_KN
SMART SM00389: Homeodomain

Unique domains/motifs


This table lists domains/motifs that are unique to Snt1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Snt1p domain/motif information see the external links section.

Last updated on 2013-12-16

Domain/motifs that are unique to Snt1p
Database source Accession number Description
PANTHER PTHR22795:SF11 UNCHARACTERIZED
Pfam PF03990 DUF348

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Snt1p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Snt1p .


The following external links can be used to directly search external databases for domain/motif information for Snt1p .