PET18/YCR020C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Pet18p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Pet18p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pet18p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Pet18p
Protein	Motifs in common with Pet18p	Other motifs in this protein (but not in Pet18p )
Hmx1p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like	Pfam PF01126: Heme_oxygenase PIR superfamily PIRSF000343: Heme oxygenase (decyclizing) PANTHER PTHR10720:SF0: HEME OXYGENASE PANTHER PTHR10720: HEME OXYGENASE
Thi20p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like Pfam PF03070: TENA_THI-4	Gene3D G3DSA:3.40.1190.20: no description SUPERFAMILY SSF53613: Ribokinase-like TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Pfam PF08543: Phos_pyr_kin
Thi21p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like Pfam PF03070: TENA_THI-4	TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase Gene3D G3DSA:3.40.1190.20: no description SUPERFAMILY SSF53613: Ribokinase-like PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Pfam PF08543: Phos_pyr_kin
Thi22p	Gene3D G3DSA:1.20.910.10: no description Pfam PF03070: TENA_THI-4 SUPERFAMILY SSF48613: Heme oxygenase-like	PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Gene3D G3DSA:3.40.1190.20: no description TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase Pfam PF08543: Phos_pyr_kin SUPERFAMILY SSF53613: Ribokinase-like

Unique domains/motifs

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This table lists domains/motifs that are unique to Pet18p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pet18p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Pet18p
Database source	Accession number	Description
PANTHER	PTHR25987	FAMILY NOT NAMED
PANTHER	PTHR25987:SF0	SUBFAMILY NOT NAMED

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Pet18p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Pet18p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Pet18p .