CIT2/YCR005C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cit2p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Cit2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cit2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cit2p
Protein	Motifs in common with Cit2p	Other motifs in this protein (but not in Cit2p )
Cit1p	PRINTS PR00143: CITRTSNTHASE PANTHER PTHR11739:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11739: CITRATE SYNTHASE TIGRFAMs TIGR01793: cit_synth_euk: citrate (Si)-synthase, eukaryotic Pfam PF00285: Citrate_synt Gene3D G3DSA:1.10.580.10: no description SUPERFAMILY SSF48256: Citrate synthase	none
Cit3p	PANTHER PTHR11739:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11739: CITRATE SYNTHASE PRINTS PR00143: CITRTSNTHASE SUPERFAMILY SSF48256: Citrate synthase Pfam PF00285: Citrate_synt Gene3D G3DSA:1.10.580.10: no description	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Cit2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cit2p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Cit2p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Cit2p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Cit2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Cit2p .