YSA1/YBR111C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ysa1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ysa1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ysa1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ysa1p
Protein	Motifs in common with Ysa1p	Other motifs in this protein (but not in Ysa1p )
Npy1p	SUPERFAMILY SSF55811: Nudix Pfam PF00293: NUDIX Gene3D G3DSA:3.90.79.10: no description	Pfam PF09297: zf-NADH-PPase PANTHER PTHR22769: MUTT/NUDIX HYDROLASE
Yjr142wp	Pfam PF00293: NUDIX SUPERFAMILY SSF55811: Nudix Gene3D G3DSA:3.90.79.10: no description	PANTHER PTHR13622:SF2: THIAMIN PYROPHOSPHOKINASE-RELATED PANTHER PTHR13622: THIAMIN PYROPHOSPHOKINASE
Pcd1p	Pfam PF00293: NUDIX Gene3D G3DSA:3.90.79.10: no description SUPERFAMILY SSF55811: Nudix	PANTHER PTHR12992:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12992: MUTT-NUDIX-RELATED
Dcp2p	SUPERFAMILY SSF55811: Nudix Pfam PF00293: NUDIX Gene3D G3DSA:3.90.79.10: no description	PANTHER PTHR23114:SF1: GB DEF: MRNA DECAPPING PROTEIN 2 (PSU1 PROTEIN) PANTHER PTHR23114: FAMILY NOT NAMED SUPERFAMILY SSF140586: Dcp2 domain-like Pfam PF05026: DCP2
Ddp1p	Pfam PF00293: NUDIX Gene3D G3DSA:3.90.79.10: no description SUPERFAMILY SSF55811: Nudix	PANTHER PTHR12629:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12629: DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE
Idi1p	SUPERFAMILY SSF55811: Nudix Gene3D G3DSA:3.90.79.10: no description Pfam PF00293: NUDIX	PANTHER PTHR10885:SF0: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE 1 PANTHER PTHR10885: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE TIGRFAMs TIGR02150: IPP_isom_1: isopentenyl-diphosphate delta-isomeras PIR superfamily PIRSF018427: Isopentenyldiphosphate isomerase

Unique domains/motifs

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This table lists domains/motifs that are unique to Ysa1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ysa1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Ysa1p
Database source	Accession number	Description
PANTHER	PTHR11839	UDP/ADP-SUGAR PYROPHOSPHATASE
PANTHER	PTHR11839:SF1	ADP-RIBOSE PYROPHOSPHATASE

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ysa1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ysa1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Ysa1p .