SKT5/YBL061C Domains/Motifs and Signal Peptides 
To directly search external databases for Skt5p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Skt5p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Skt5p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Skt5p | ||
|---|---|---|
| Protein | Motifs in common with Skt5p | Other motifs in this protein (but not in Skt5p ) |
| Sec17p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like PRINTS PR00448: NSFATTACHMNT PANTHER PTHR13768:SF5: VESICULAR-FUSION PROTEIN SEC17 PANTHER PTHR13768: SOLUBLE NSF ATTACHMENT PROTEIN (SNAP) |
| Cdc27p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like SMART SM00028: Tetratricopeptide repeats Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 Pfam PF12895: Apc3 PANTHER PTHR12558:SF11: CELL DIVISION CYCLE 27 PANTHER PTHR12558: CELL DIVISION CYCLE 16,23,27 |
| Dsf2p | PANTHER PTHR11102: SEL-1-LIKE PROTEIN Pfam PF08238: Sel1 SMART SM00671: Sel1-like repeats. SUPERFAMILY SSF81901: HCP-like Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR11102:SF36: PROTEIN SHC1 |
| Prp6p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF06424: PRP1_N PANTHER PTHR11246:SF1: PRE-MRNA SPLICING FACTOR PANTHER PTHR11246: PRE-MRNA SPLICING FACTOR SMART SM00028: Tetratricopeptide repeats SMART SM00386: HAT (Half-A-TPR) repeats SUPERFAMILY SSF48452: TPR-like |
| Cyc8p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 Pfam PF07719: TPR_2 SMART SM00028: Tetratricopeptide repeats PANTHER PTHR14017:SF1: GLUCOSE REPRESSION MEDIATOR PROTEIN-RELATED PANTHER PTHR14017: GLUCOSE REPRESSION MEDIATOR PROTEIN SUPERFAMILY SSF48452: TPR-like |
| Cns1p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 SMART SM00028: Tetratricopeptide repeats PANTHER PTHR22904:SF24: CYCLOPHILIN SEVEN SUPPRESSOR 1 PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN SUPERFAMILY SSF48452: TPR-like |
| Tah1p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN SMART SM00028: Tetratricopeptide repeats Pfam PF13414: TPR_11 |
| Nat1p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF12569: NARP1 SMART SM00028: Tetratricopeptide repeats PIR superfamily PIRSF000422: N-terminal acetyltransferase A, auxiliary subunit SUPERFAMILY SSF48452: TPR-like PANTHER PTHR22767:SF2: N-TERMINAL ACETLYTRANSFERASE-RELATED PANTHER PTHR22767: N-TERMINAL ACETLYTRANSFERASE-RELATED |
| Rpn6p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00753: PCI/PINT associated module SMART SM00088: motif in proteasome subunits, Int-6, Nip-1 a Pfam PF01399: PCI Pfam PF13429: TPR_15 Gene3D G3DSA:1.10.10.10: no description SUPERFAMILY SSF46785: "Winged helix" DNA-binding domain PANTHER PTHR10678:SF2: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11 (26S PROTEASOME REGULATORY SUBUNIT S9) PANTHER PTHR10678: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| Mss2p | SUPERFAMILY SSF81901: HCP-like Gene3D G3DSA:1.25.40.10: no description |
none |
| Ack1p | Pfam PF08238: Sel1 Gene3D G3DSA:1.25.40.10: no description PANTHER PTHR11102: SEL-1-LIKE PROTEIN SUPERFAMILY SSF81901: HCP-like SMART SM00671: Sel1-like repeats. |
PANTHER PTHR11102:SF33: PREDICTED: SIMILAR TO SEL1 DOMAIN CONTAINING PROTEIN RGD735029 |
| Vps41p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00320: WD40 repeats SMART SM00299: Clathrin heavy chain repeat homology Gene3D G3DSA:2.130.10.10: no description PANTHER PTHR12616:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12616: VACUOLAR PROTEIN SORTING VPS41 Pfam PF00637: Clathrin Pfam PF00400: WD40 PIR superfamily PIRSF028921: Vacuolar protein sorting-associated protein Vps41 SUPERFAMILY SSF50978: WD40 repeat-like |
| Ydr161wp | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like |
| Pex5p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like Pfam PF13414: TPR_11 Pfam PF13181: TPR_8 SMART SM00028: Tetratricopeptide repeats PANTHER PTHR10130:SF0: PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR (PEX5) PANTHER PTHR10130: PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR (PEX5) |
| Swa2p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR23172:SF19: AUXILIN PANTHER PTHR23172: AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Pfam PF09145: Ubiq-assoc Gene3D G3DSA:1.10.8.10: no description Gene3D G3DSA:1.10.287.110: no description SUPERFAMILY SSF46565: Chaperone J-domain SUPERFAMILY SSF46934: UBA-like SUPERFAMILY SSF48452: TPR-like |
| Syf1p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00386: HAT (Half-A-TPR) repeats PANTHER PTHR11246:SF6: SYNTHETIC LETHAL WITH CDCFORTY PANTHER PTHR11246: PRE-MRNA SPLICING FACTOR |
| Utp6p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF08640: U3_assoc_6 PANTHER PTHR23271:SF2: U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 (U3 SNORNA-ASSOCIATED PROTEIN 6) PANTHER PTHR23271: HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 SMART SM00386: HAT (Half-A-TPR) repeats |
| Shc1p | SUPERFAMILY SSF81901: HCP-like Gene3D G3DSA:1.25.40.10: no description Pfam PF08238: Sel1 PANTHER PTHR11102: SEL-1-LIKE PROTEIN SMART SM00671: Sel1-like repeats. |
PANTHER PTHR11102:SF31: SUBFAMILY NOT NAMED |
| Chc1p | Gene3D G3DSA:1.25.40.10: no description |
PIR superfamily PIRSF002290: Clathrin heavy chain Gene3D G3DSA:2.130.10.110: no description SMART SM00299: Clathrin heavy chain repeat homology Pfam PF00637: Clathrin Pfam PF13838: Clathrin_H_link Pfam PF01394: Clathrin_propel Pfam PF09268: Clathrin-link SUPERFAMILY SSF50989: Clathrin heavy-chain terminal domain SUPERFAMILY SSF48371: ARM repeat PANTHER PTHR10292:SF1: CLATHRIN HEAVY CHAIN PANTHER PTHR10292: CLATHRIN HEAVY CHAIN |
| Tfc4p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13174: TPR_6 PANTHER PTHR23082: TRANSCRIPTION INITIATION FACTOR IIIC (TFIIIC), POLYPEPTIDE 3-RELATED SUPERFAMILY SSF48452: TPR-like |
| Ppt1p | Gene3D G3DSA:1.25.40.10: no description |
PIR superfamily PIRSF033096: Protein phosphatase 5 PANTHER PTHR11668:SF12: PROTEIN PHOSPHATASE-5 PANTHER PTHR11668: SERINE/THREONINE PROTEIN PHOSPHATASE Pfam PF00149: Metallophos Pfam PF13414: TPR_11 Pfam PF07719: TPR_2 Pfam PF08321: PPP5 SMART SM00028: Tetratricopeptide repeats SMART SM00156: Protein phosphatase 2A homologues, catalytic PRINTS PR00114: STPHPHTASE Gene3D G3DSA:3.60.21.10: no description SUPERFAMILY SSF56300: Metallo-dependent phosphatases SUPERFAMILY SSF48452: TPR-like |
| Ypp1p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like |
| Tra1p | Gene3D G3DSA:1.25.40.10: no description |
Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:1.10.1070.11: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF48371: ARM repeat PANTHER PTHR11139:SF2: TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN PANTHER PTHR11139: ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED SMART SM00146: Phosphoinositide 3-kinase, catalytic domain Pfam PF02259: FAT Pfam PF00454: PI3_PI4_kinase Pfam PF02260: FATC |
| Tom71p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 Pfam PF13181: TPR_8 SUPERFAMILY SSF48452: TPR-like PANTHER PTHR22904:SF33: MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR, YEAST PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN SMART SM00028: Tetratricopeptide repeats |
| Cdc23p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR12558:SF10: CELL DIVISION CYCLE 23 PANTHER PTHR12558: CELL DIVISION CYCLE 16,23,27 Pfam PF04049: APC8 Pfam PF13181: TPR_8 Pfam PF13414: TPR_11 SUPERFAMILY SSF48452: TPR-like SMART SM00028: Tetratricopeptide repeats |
| Fis1p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR13247: TETRATRICOPEPTIDE REPEAT PROTEIN 11 (TPR REPEAT PROTEIN 11) PIR superfamily PIRSF008835: Mitochondrial fission 1 protein SUPERFAMILY SSF48452: TPR-like |
| Chs6p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like Pfam PF09295: ChAPs PANTHER PTHR31975:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31975: FAMILY NOT NAMED |
| Cpr7p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00028: Tetratricopeptide repeats PRINTS PR00153: CSAPPISMRASE SUPERFAMILY SSF50891: Cyclophilin-like SUPERFAMILY SSF48452: TPR-like Gene3D G3DSA:2.40.100.10: no description PANTHER PTHR11071:SF48: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PANTHER PTHR11071: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Pfam PF00160: Pro_isomerase Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 |
| Emc2p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR12760: TETRATRICOPEPTIDE REPEAT PROTEIN SUPERFAMILY SSF48452: TPR-like |
| Cdc16p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF07719: TPR_2 Pfam PF13414: TPR_11 Pfam PF12895: Apc3 SUPERFAMILY SSF48452: TPR-like SMART SM00028: Tetratricopeptide repeats PANTHER PTHR12558:SF9: CELL DIVISION CYCLE 16 PANTHER PTHR12558: CELL DIVISION CYCLE 16,23,27 |
| Ykl133cp | Gene3D G3DSA:1.25.40.10: no description |
none |
| Hif1p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF10516: SHNi-TPR |
| Clf1p | Gene3D G3DSA:1.25.40.10: no description SUPERFAMILY SSF81901: HCP-like |
PANTHER PTHR11246:SF3: CROOKED NECK PROTEIN PANTHER PTHR11246: PRE-MRNA SPLICING FACTOR SMART SM00386: HAT (Half-A-TPR) repeats SUPERFAMILY SSF48452: TPR-like Pfam PF02184: HAT |
| Hrd3p | SMART SM00671: Sel1-like repeats. Gene3D G3DSA:1.25.40.10: no description Pfam PF08238: Sel1 SUPERFAMILY SSF81901: HCP-like PANTHER PTHR11102: SEL-1-LIKE PROTEIN |
PANTHER PTHR11102:SF32: PREDICTED: SIMILAR TO SEL1 DOMAIN CONTAINING PROTEIN RGD735029, PARTIAL |
| Cpr6p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR11071:SF130: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PANTHER PTHR11071: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE SMART SM00028: Tetratricopeptide repeats Gene3D G3DSA:2.40.100.10: no description Gene3D G3DSA:1.10.150.160: no description PRINTS PR00153: CSAPPISMRASE SUPERFAMILY SSF50891: Cyclophilin-like SUPERFAMILY SSF48452: TPR-like Pfam PF00160: Pro_isomerase Pfam PF00515: TPR_1 |
| Sec72p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF48452: TPR-like SMART SM00028: Tetratricopeptide repeats Pfam PF07719: TPR_2 |
| Clu1p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF103107: Hypothetical protein c14orf129, hspc210 SUPERFAMILY SSF48452: TPR-like PANTHER PTHR12601: EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3) Pfam PF13236: CLU Pfam PF12807: eIF3_p135 |
| Ymr018wp | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 PANTHER PTHR10130: PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR (PEX5) SUPERFAMILY SSF48452: TPR-like |
| Rna14p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR19980: RNA CLEAVAGE STIMULATION FACTOR Pfam PF05843: Suf SMART SM00386: HAT (Half-A-TPR) repeats |
| Mgr3p | Gene3D G3DSA:1.25.40.10: no description |
none |
| Rrp5p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR23270:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23270: PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5) SMART SM00316: Ribosomal protein S1-like RNA-binding domain SMART SM00386: HAT (Half-A-TPR) repeats SUPERFAMILY SSF50249: Nucleic acid-binding proteins SUPERFAMILY SSF48452: TPR-like Gene3D G3DSA:2.40.50.140: no description Pfam PF00575: S1 |
| Tom70p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 Pfam PF13432: TPR_16 SUPERFAMILY SSF48452: TPR-like TIGRFAMs TIGR00990: 3a0801s09: mitochondrial precursor proteins import PANTHER PTHR22904:SF33: MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR, YEAST PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN SMART SM00028: Tetratricopeptide repeats |
| Emw1p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00028: Tetratricopeptide repeats Pfam PF13414: TPR_11 PANTHER PTHR16193: UNCHARACTERIZED SUPERFAMILY SSF48452: TPR-like |
| Ctr9p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF07719: TPR_2 Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 Pfam PF13181: TPR_8 SMART SM00028: Tetratricopeptide repeats SUPERFAMILY SSF48452: TPR-like PANTHER PTHR14027:SF1: CTR9 PROTEIN PANTHER PTHR14027: TPR REPEAT NUCLEAR PHOSPHOPROTEIN/CTR9 |
| Sgt2p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 SMART SM00028: Tetratricopeptide repeats PANTHER PTHR22904:SF11: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN SUPERFAMILY SSF48452: TPR-like |
| Sti1p | Gene3D G3DSA:1.25.40.10: no description |
SMART SM00028: Tetratricopeptide repeats SMART SM00727: Heat shock chaperonin-binding motif. PANTHER PTHR22904:SF75: SUBFAMILY NOT NAMED PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN Pfam PF13414: TPR_11 Pfam PF00515: TPR_1 SUPERFAMILY SSF48452: TPR-like |
| Ett1p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF12753: Nro1 |
| Sgt1p | Gene3D G3DSA:1.25.40.10: no description |
SUPERFAMILY SSF49764: HSP20-like chaperones PANTHER PTHR22904:SF8: SGT-1-RELATED PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN Gene3D G3DSA:2.60.40.790: no description Pfam PF05002: SGS Pfam PF04969: CS |
| Dia2p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR22904:SF50: PREDICTED: SIMILAR TO TTC9C PROTEIN PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN Pfam PF00646: F-box SUPERFAMILY SSF48452: TPR-like SUPERFAMILY SSF52047: RNI-like Gene3D G3DSA:3.80.10.10: no description SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00367: Leucine-rich repeat - CC (cysteine-containin |
| Bud7p | Gene3D G3DSA:1.25.40.10: no description |
Pfam PF09295: ChAPs SUPERFAMILY SSF48452: TPR-like PANTHER PTHR31975:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31975: FAMILY NOT NAMED |
| Srp72p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR14094:SF17: SUBFAMILY NOT NAMED PANTHER PTHR14094: SIGNAL RECOGNITION PARTICLE 72 SUPERFAMILY SSF48452: TPR-like Pfam PF08492: SRP72 Pfam PF07719: TPR_2 |
| Rpn7p | Gene3D G3DSA:1.25.40.10: no description |
Gene3D G3DSA:1.10.10.10: no description SUPERFAMILY SSF46785: "Winged helix" DNA-binding domain Pfam PF10602: RPN7 Pfam PF01399: PCI SMART SM00088: motif in proteasome subunits, Int-6, Nip-1 a PANTHER PTHR14145:SF1: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6 PANTHER PTHR14145: 26S PROTESOME SUBUNIT 6 |
| Ski3p | Gene3D G3DSA:1.25.40.10: no description |
PANTHER PTHR15704:SF4: SUBFAMILY NOT NAMED PANTHER PTHR15704: SUPERKILLER 3 PROTEIN-RELATED SUPERFAMILY SSF48452: TPR-like SUPERFAMILY SSF48439: Protein prenylyltransferase SMART SM00028: Tetratricopeptide repeats Pfam PF13414: TPR_11 |
This table lists domains/motifs that are unique to Skt5p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Skt5p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Skt5p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR11102:SF12 | SEL-1-LIKE PROTEIN SKT5 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Skt5p .
