CCR4/YAL021C Domains/Motifs and Signal Peptides 
To directly search external databases for Ccr4p domain/motif information see the external links section.
| Click on image for expanded interactive view |
|---|
This table lists proteins that share domains/motifs in common with those found in Ccr4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ccr4p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Ccr4p | ||
|---|---|---|
| Protein | Motifs in common with Ccr4p | Other motifs in this protein (but not in Ccr4p ) |
| Apn2p | Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like Pfam PF03372: Exo_endo_phos |
PANTHER PTHR22748:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22748: AP ENDONUCLEASE Pfam PF06839: zf-GRF |
| Ecm33p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Amn1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like PANTHER PTHR23125:SF9: GB DEF: HYPOTHETICAL 62.7 KDA PROTEIN IN CNS1-CDC28 INTERGENIC REGION PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SMART SM00367: Leucine-rich repeat - CC (cysteine-containin |
| Sps22p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Cwh43p | SUPERFAMILY SSF56219: DNase I-like Pfam PF03372: Exo_endo_phos |
PANTHER PTHR14859:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14859: CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Pfam PF10277: Frag1 |
| Pst1p | SUPERFAMILY SSF52058: L domain-like |
PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Ydr131cp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Ydr306cp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Sps2p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Pac2p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR15140:SF6: SUBFAMILY NOT NAMED PANTHER PTHR15140: TUBULIN-SPECIFIC CHAPERONE E Pfam PF01302: CAP_GLY Pfam PF13516: LRR_6 Pfam PF00560: LRR_1 SUPERFAMILY SSF52047: RNI-like SUPERFAMILY SSF74924: Cap-Gly domain SUPERFAMILY SSF54236: Ubiquitin-like SMART SM01052: no description Gene3D G3DSA:2.30.30.190: no description |
| Isc1p | Gene3D G3DSA:3.60.10.10: no description Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like |
PANTHER PTHR12393:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12393: SPHINGOMYELIN PHOSPHODIESTERASE RELATED |
| Inp51p | Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description |
PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE SMART SM00128: Inositol polyphosphate phosphatase, catalyti Pfam PF02383: Syja_N |
| Cyr1p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description Pfam PF12799: LRR_4 |
SUPERFAMILY SSF81606: PP2C-like SUPERFAMILY SSF55073: Nucleotide cyclase SUPERFAMILY SSF52047: RNI-like SMART SM00789: Adenylate cyclase G-alpha binding doma SMART SM00314: Ras association (RalGDS/AF-6) domain SMART SM00332: Serine/threonine phosphatases, family SMART SM00044: Adenylyl- / guanylyl cyclase, catalyti PANTHER PTHR23155:SF19: ADENYLATE CYCLASE PANTHER PTHR23155: LEUCINE-RICH REPEAT-CONTAINING PROTEIN Gene3D G3DSA:3.60.40.10: no description Gene3D G3DSA:3.30.70.1230: no description Pfam PF00481: PP2C Pfam PF13855: LRR_8 Pfam PF00211: Guanylate_cyc Pfam PF00560: LRR_1 Pfam PF08509: Ad_cyc_g-alpha Pfam PF00788: RA |
| Mhp1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Rad7p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR23125:SF43: RAD7 PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SUPERFAMILY SSF52047: RNI-like |
| Grr1p | Gene3D G3DSA:3.80.10.10: no description |
SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00367: Leucine-rich repeat - CC (cysteine-containin PANTHER PTHR23125:SF63: GB DEF: UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1 PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SUPERFAMILY SSF52047: RNI-like |
| Sds22p | SMART SM00369: Leucine-rich repeats, typical (most populate Pfam PF12799: LRR_4 SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SMART SM00365: Leucine-rich repeat, SDS22-like subfamily PANTHER PTHR10588: FAMILY NOT NAMED Pfam PF13855: LRR_8 |
| Ylr352wp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like PANTHER PTHR23125:SF188: SUBFAMILY NOT NAMED PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN |
| Ngl3p | SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description Pfam PF03372: Exo_endo_phos PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4 |
PANTHER PTHR12121:SF5: NOCTURNIN-RELATED |
| Ctf13p | Gene3D G3DSA:3.80.10.10: no description |
none |
| Rna1p | Gene3D G3DSA:3.80.10.10: no description |
Pfam PF13516: LRR_6 PANTHER PTHR25480:SF105: NOVEL PROTEIN (FRAGMENT) PANTHER PTHR25480: FAMILY NOT NAMED SUPERFAMILY SSF52047: RNI-like SMART SM00368: Leucine rich repeat, ribonuclease inhibitor |
| Roy1p | Gene3D G3DSA:3.80.10.10: no description |
none |
| Ngl2p | Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4 SUPERFAMILY SSF56219: DNase I-like |
PANTHER PTHR12121:SF5: NOCTURNIN-RELATED |
| Inp52p | Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like |
Pfam PF02383: Syja_N SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE |
| Ngl1p | Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4 |
PANTHER PTHR12121:SF11: GLUCOSE-REPRESSIBLE ALCOHOL DEHYDROGENASE TRANSCRIPTIONAL EFFECTOR |
| Inp54p | Pfam PF03372: Exo_endo_phos Gene3D G3DSA:3.60.10.10: no description SUPERFAMILY SSF56219: DNase I-like |
SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF16: GB DEF: S.CEREVISIAE CHROMOSOME XV READING FRAME ORF YOL065C PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE |
| Dia2p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR22904:SF50: PREDICTED: SIMILAR TO TTC9C PROTEIN PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN Pfam PF00646: F-box SUPERFAMILY SSF48452: TPR-like SUPERFAMILY SSF52047: RNI-like Gene3D G3DSA:1.25.40.10: no description SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00367: Leucine-rich repeat - CC (cysteine-containin |
| Inp53p | Pfam PF03372: Exo_endo_phos SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description |
SMART SM00128: Inositol polyphosphate phosphatase, catalyti PANTHER PTHR11200:SF68: INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE PANTHER PTHR11200: INOSITOL 5-PHOSPHATASE Pfam PF02383: Syja_N |
| Her1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Sog2p | SUPERFAMILY SSF52058: L domain-like SMART SM00369: Leucine-rich repeats, typical (most populate Gene3D G3DSA:3.80.10.10: no description |
Pfam PF10428: SOG2 Pfam PF13855: LRR_8 PANTHER PTHR23155:SF264: PREDICTED PROTEIN PANTHER PTHR23155: LEUCINE-RICH REPEAT-CONTAINING PROTEIN |
| Nud1p | Gene3D G3DSA:3.80.10.10: no description SUPERFAMILY SSF52058: L domain-like |
PANTHER PTHR10588:SF101: SUBFAMILY NOT NAMED PANTHER PTHR10588: FAMILY NOT NAMED |
| Gip3p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Mex67p | Gene3D G3DSA:3.80.10.10: no description SUPERFAMILY SSF52058: L domain-like |
PANTHER PTHR10662:SF22: MRNA EXPORT FACTOR MEX67 PANTHER PTHR10662: NUCLEAR RNA EXPORT FACTOR SMART SM00804: C-terminal domain of vertebrate Tap protein Gene3D G3DSA:3.10.450.50: no description Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF54427: NTF2-like SUPERFAMILY SSF46934: UBA-like Pfam PF03943: TAP_C |
| Lea1p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SMART SM00446: occurring C-terminal to leucine-rich repeats PANTHER PTHR10552: U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
This table lists domains/motifs that are unique to Ccr4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ccr4p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Ccr4p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR12121:SF13 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Ccr4p .
