YCL048W-A Feature History Help

Sequence Annotation Notes
2005-11-14Based on genome sequence comparisons among six Saccharomyces species, Cliften et al. 2003 suggested that a new ORF, YCL048W-A, be added to the S. cerevisiae genome annotation. This suggestion was later confirmed by Zhang and Dietrich 2005 using high-throughput identification of transcription start sites.

Cliften P, et al.  (2003) Finding functional features in Saccharomyces genomes by phylogenetic footprinting. Science 301(5629):71-6
Zhang Z and Dietrich FS  (2005) Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE. Nucleic Acids Res 33(9):2838-51
Mapping Notes
2012-08-21The section of Chromosome III spanning YCL024W to YCL051W and the region of Chromosome IV spanning YDR507C to YDR528W represent paralogous segments that arose from the whole genome duplication. These regions contain the following pairs of paralogous genes:
YCL024W/KCC4 and YDR507C/GIN4
YCL025C/AGP1 and YDR508C/GNP1
YCL035C/GRX1 and YDR513W/GRX2
YCL036W/GFD2 and YDR514C
YCL037C/SRO9 and YDR515W/SLF1
YCL040W/GLK1 and YDR516C/EMI2
YCL043C/PDI1 and YDR518W/EUG1
YCL048W/SPS22 and YDR522C/SPS2
YCL048W-A and YDR524C-B
YCL050C/APA1 and YDR530C/APA2
YCL051W/LRE1 and YDR528W/HLR1

Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61