URN1/YPR152C Summary Help

Standard Name URN1 1, 2
Systematic Name YPR152C
Feature Type ORF, Verified
Description Putative protein of unknown function containing WW and FF domains; overexpression causes accumulation of cells in G1 phase (2, 3, 4)
Name Description U2-U5-U6 snRNP, RES complex, and NTC interacting protein 1
Chromosomal Location
ChrXVI:833458 to 832061 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All URN1 GO evidence and references
  View Computational GO annotations for URN1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 6 genes
Resources
Classical genetics
overexpression
Large-scale survey
null
overexpression
Resources
265 total interaction(s) for 234 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 168
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 2
  • Biochemical Activity: 8
  • Co-purification: 1
  • Protein-peptide: 40
  • Reconstituted Complex: 1
  • Two-hybrid: 7

Genetic Interactions
  • Negative Genetic: 20
  • Positive Genetic: 6
  • Synthetic Growth Defect: 10

Resources
Expression Summary
histogram
Resources
Length (a.a.) 465
Molecular Weight (Da) 54,138
Isoelectric Point (pI) 4.41
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:833458 to 832061 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1398 833458..832061 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000006356
References cited on this page View Complete Literature Guide for URN1
1) Field DJ, et al.  (2006) personal communication
2) Bonet R, et al.  (2008) Solution structure of the yeast URN1 splicing factor FF domain: Comparative analysis of charge distributions in FF domain structures-FFs and SURPs, two domains with a similar fold. Proteins 73(4):1001-1009
3) Hesselberth JR, et al.  (2006) Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins. Genome Biol 7(4):R30
4) Niu W, et al.  (2008) Mechanisms of Cell Cycle Control Revealed by a Systematic and Quantitative Overexpression Screen in S. cerevisiae. PLoS Genet 4(7):e1000120