tR(UCU)J2 Summary

Systematic Name	tR(UCU)J2
Feature Type	tRNA
Description	Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis; one of 11 nuclear tRNA genes containing the tDNA-anticodon UCU (converted to mcm5-UCU in the mature tRNA), decodes AGA codons into arginine, one of 19 nuclear tRNAs for arginine (1, 2, 3, 4, 5)

Chromosomal Location	ChrX:374577 to 374506 \| ORF Map \| GBrowse
	Note: this feature is encoded on the Crick strand.


Molecular Function
Manually curated	triplet codon-amino acid adaptor activity (TAS)
Biological Process
Manually curated	translational elongation (NAS)
Cellular Component
Manually curated	cytosol (NAS)

	1 total interaction(s) for 1 unique genes/features.
Physical Interactions	Protein-RNA: 1
Resources	BioGRID

sequence information

ChrX:374577 to 374506 | |

Note: this feature is encoded on the Crick strand.

This feature is contained within: ARS1012

Last Update

Coordinates: 2011-02-03 | Sequence: 2000-05-19

Subfeature details

	Relative Coordinates	Chromosomal Coordinates	Most Recent Updates
	Relative Coordinates	Chromosomal Coordinates	Coordinates	Sequence
Noncoding exon	1..72	374577..374506	2011-02-03	2000-05-19

Retrieve sequences

Analyze Sequence

S288C only	ATCC/WashU Clones \| BLASTN \| Design Primers \| Restriction Fragment Map \| Restriction Fragment Sizes
S288C vs. other species	BLASTN vs. fungi

Resources

External Links	All Associated Seq \| Search all NCBI (Entrez)

Primary SGDID	S000006715

1)	Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30
2)	Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96
3)	Straby KB (1988) A yeast tRNA(Arg) gene can act as promoter for a 5' flank deficient, non-transcribable tRNA(SUP)6 gene to produce biologically active suppressor tRNA. Nucleic Acids Res 16(7):2841-57
4)	Huang B, et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94
5)	Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7