CCL1/YPR025C Summary Help

Standard Name CCL1 1
Systematic Name YPR025C
Feature Type ORF, Verified
Description Cyclin associated with protein kinase Kin28p; Kin28p is the TFIIH-associated carboxy-terminal domain (CTD) kinase involved in transcription initiation at RNA polymerase II promoters (1, 2)
Chromosomal Location
ChrXVI:614558 to 613377 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All CCL1 GO evidence and references
  View Computational GO annotations for CCL1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 4 genes
Resources
Large-scale survey
null
reduction of function
unspecified
Resources
67 total interaction(s) for 39 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 26
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 4
  • Biochemical Activity: 1
  • Co-crystal Structure: 1
  • Co-purification: 8
  • PCA: 3
  • Reconstituted Complex: 2
  • Two-hybrid: 3

Genetic Interactions
  • Dosage Growth Defect: 2
  • Dosage Rescue: 2
  • Negative Genetic: 2
  • Positive Genetic: 7
  • Synthetic Lethality: 4

Resources
Expression Summary
histogram
Resources
Length (a.a.) 393
Molecular Weight (Da) 45,210
Isoelectric Point (pI) 6.87
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:614558 to 613377 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1182 614558..613377 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000006229
References cited on this page View Complete Literature Guide for CCL1
1) Valay JG, et al.  (1993) The kin28 protein kinase is associated with a cyclin in Saccharomyces cerevisiae. J Mol Biol 234(2):307-10
2) Rodriguez CR, et al.  (2000) Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II. Mol Cell Biol 20(1):104-12