NOP58/YOR310C Summary Help

Standard Name NOP58 1
Systematic Name YOR310C
Alias NOP5 2
Feature Type ORF, Verified
Description Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA (1, 2, 3, 4)
Name Description NucleOlar Protein of 58 kDa 1
Chromosomal Location
ChrXV:898360 to 896825 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All NOP58 GO evidence and references
  View Computational GO annotations for NOP58
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Classical genetics
null
repressible
Large-scale survey
null
reduction of function
Resources
367 total interaction(s) for 196 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 303
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 18
  • PCA: 1
  • Reconstituted Complex: 2
  • Two-hybrid: 11

Genetic Interactions
  • Dosage Rescue: 1
  • Negative Genetic: 19
  • Positive Genetic: 2
  • Synthetic Growth Defect: 3
  • Synthetic Lethality: 5

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXV:898360 to 896825 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1536 898360..896825 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000005837
References cited on this page View Complete Literature Guide for NOP58
1) Gautier T, et al.  (1997) Nucleolar KKE/D repeat proteins Nop56p and Nop58p interact with Nop1p and are required for ribosome biogenesis. Mol Cell Biol 17(12):7088-98
2) Wu P, et al.  (1998) Nop5p is a small nucleolar ribonucleoprotein component required for pre-18 S rRNA processing in yeast. J Biol Chem 273(26):16453-63
3) Lafontaine DL and Tollervey D  (1999) Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability. RNA 5(3):455-67
4) Dragon F, et al.  (2002) A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417(6892):967-70