YIP3/YNL044W Summary Help

Standard Name YIP3
Systematic Name YNL044W
Feature Type ORF, Verified
Description Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p (1, 2, 3)
Chromosomal Location
ChrXIV:545268 to 545877 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All YIP3 GO evidence and references
  View Computational GO annotations for YIP3
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
null
overexpression
Large-scale survey
null
Resources
113 total interaction(s) for 74 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 6
  • Affinity Capture-RNA: 3
  • Affinity Capture-Western: 10
  • Co-fractionation: 1
  • Co-purification: 2
  • PCA: 10
  • Two-hybrid: 27

Genetic Interactions
  • Negative Genetic: 45
  • Phenotypic Enhancement: 2
  • Phenotypic Suppression: 2
  • Positive Genetic: 3
  • Synthetic Growth Defect: 2

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIV:545268 to 545877 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1999-11-17
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..24 545268..545291 2011-02-03 1999-11-17
Intron 25..103 545292..545370 2011-02-03 1999-11-17
CDS 104..610 545371..545877 2011-02-03 1999-11-17
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000004989
References cited on this page View Complete Literature Guide for YIP3
1) Otte S, et al.  (2001) Erv41p and Erv46p: new components of COPII vesicles involved in transport between the ER and Golgi complex. J Cell Biol 152(3):503-18
2) Calero M and Collins RN  (2002) Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins. Biochem Biophys Res Commun 290(2):676-81
3) Geng J, et al.  (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74