YIP4/YGL198W Summary Help

Standard Name YIP4 1
Systematic Name YGL198W
Feature Type ORF, Verified
Description Protein that interacts with Rab GTPases; localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport (1, 2, 3)
Name Description Ypt-Interacting Protein 2
Chromosomal Location
ChrVII:123591 to 124298 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All YIP4 GO evidence and references
  View Computational GO annotations for YIP4
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 5 genes
Resources
Large-scale survey
null
Resources
48 total interaction(s) for 32 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 3
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 3
  • Reconstituted Complex: 15
  • Two-hybrid: 16

Genetic Interactions
  • Dosage Growth Defect: 2
  • Negative Genetic: 7

Resources
Expression Summary
histogram
Resources
Length (a.a.) 235
Molecular Weight (Da) 25,995
Isoelectric Point (pI) 7
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrVII:123591 to 124298 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2004-01-23
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..708 123591..124298 2011-02-03 2004-01-23
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003166
References cited on this page View Complete Literature Guide for YIP4
1) Samanta MP and Liang S  (2003) Predicting protein functions from redundancies in large-scale protein interaction networks. Proc Natl Acad Sci U S A 100(22):12579-83
2) Calero M, et al.  (2002) Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors. FEBS Lett 515(1-3):89-98
3) Inadome H, et al.  (2007) Tvp38, Tvp23, Tvp18 and Tvp15: Novel membrane proteins in the Tlg2-containing Golgi/endosome compartments of Saccharomyces cerevisiae. Exp Cell Res 313(4):688-97