LYS14/YDR034C Summary Help

Standard Name LYS14 1
Systematic Name YDR034C
Feature Type ORF, Verified
Description Transcriptional activator involved in regulation of genes of the lysine biosynthesis pathway; requires 2-aminoadipate semialdehyde as co-inducer (2, 3, 4, 5)
Name Description LYSine requiring
Chromosomal Location
ChrIV:512109 to 509737 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Genetic position: 8 cM
Gene Ontology Annotations All LYS14 GO evidence and references
  View Computational GO annotations for LYS14
Molecular Function
Manually curated
High-throughput
Biological Process
Manually curated
Cellular Component
Manually curated
Regulatory Role
Binding motifs
    Regulatory modules predicted: cellcycle (263)
    Resources
    Classical genetics
    reduction of function
    Large-scale survey
    null
    overexpression
    Resources
    19 total interaction(s) for 19 unique genes/features.
    Physical Interactions
    • Affinity Capture-MS: 3
    • Affinity Capture-RNA: 1
    • Two-hybrid: 2

    Genetic Interactions
    • Negative Genetic: 11
    • Synthetic Growth Defect: 2

    Resources
    Expression Summary
    histogram
    Resources
    Localization
    Phosphorylation PhosphoGRID | PhosphoPep Database
    Structure
    Homologs
    sequence information
    ChrIV:512109 to 509737 | ORF Map | GBrowse
    Note: this feature is encoded on the Crick strand.
    SGD ORF map
    Genetic position: 8 cM
    Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
    Subfeature details
    Relative
    Coordinates
    Chromosomal
    Coordinates
    Most Recent Updates
    Coordinates Sequence
    CDS 1..2373 512109..509737 2011-02-03 1996-07-31
    Retrieve sequences
    Analyze Sequence
    S288C only
    S288C vs. other species
    S288C vs. other strains
    Resources
    External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
    Primary SGDIDS000002441
    References cited on this page View Complete Literature Guide for LYS14
    1) Contopoulou, C.R.  (1989) Personal Communication, Mortimer Map Edition 10
    2) Becker B, et al.  (1998) A nonameric core sequence is required upstream of the LYS genes of Saccharomyces cerevisiae for Lys14p-mediated activation and apparent repression by lysine. Mol Microbiol 29(1):151-63
    3) Feller A, et al.  (1994) Repression of the genes for lysine biosynthesis in Saccharomyces cerevisiae is caused by limitation of Lys14-dependent transcriptional activation. Mol Cell Biol 14(10):6411-8
    4) Ramos F, et al.  (1988) Control of enzyme synthesis in the lysine biosynthetic pathway of Saccharomyces cerevisiae. Evidence for a regulatory role of gene LYS14. Eur J Biochem 171(1-2):171-6
    5) El Alami M, et al.  (2002) The proper folding of a long C-terminal segment of the yeast Lys14p regulator is required for activation of LYS genes in response to the metabolic effector. Mol Microbiol 43(6):1629-39
    6) Zhu C, et al.  (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19(4):556-66
    7) Badis G, et al.  (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32(6):878-87