UBC9/YDL064W Summary Help

Standard Name UBC9
Systematic Name YDL064W
Feature Type ORF, Verified
Description SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC) (1, 2, 3)
Name Description UBiquitin-Conjugating
Chromosomal Location
ChrIV:337487 to 338070 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All UBC9 GO evidence and references
  View Computational GO annotations for UBC9
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
activation
conditional
repressible
Large-scale survey
conditional
null
repressible
Resources
104 total interaction(s) for 57 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 3
  • Affinity Capture-RNA: 3
  • Affinity Capture-Western: 6
  • Biochemical Activity: 8
  • Co-crystal Structure: 2
  • PCA: 2
  • Reconstituted Complex: 12
  • Two-hybrid: 37

Genetic Interactions
  • Dosage Lethality: 1
  • Dosage Rescue: 1
  • Phenotypic Enhancement: 2
  • Synthetic Growth Defect: 7
  • Synthetic Lethality: 15
  • Synthetic Rescue: 5

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIV:337487 to 338070 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2004-02-11 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..38 337487..337524 2004-02-11 1996-07-31
Intron 39..148 337525..337634 2004-02-11 1996-07-31
CDS 149..584 337635..338070 2004-02-11 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000002222
References cited on this page View Complete Literature Guide for UBC9
1) Seufert W, et al.  (1995) Role of a ubiquitin-conjugating enzyme in degradation of S- and M-phase cyclins. Nature 373(6509):78-81
2) Johnson ES and Blobel G  (1997) Ubc9p is the conjugating enzyme for the ubiquitin-like protein Smt3p. J Biol Chem 272(43):26799-802
3) Dieckhoff P, et al.  (2004) Smt3/SUMO and Ubc9 are required for efficient APC/C-mediated proteolysis in budding yeast. Mol Microbiol 51(5):1375-87