RIM1/YCR028C-A Summary Help

Standard Name RIM1 1
Systematic Name YCR028C-A
Feature Type ORF, Verified
Description ssDNA-binding protein essential for mitochondrial genome maintenance; involved in mitochondrial DNA replication (1, 2)
Name Description Replication In Mitochondria 1
Chromosomal Location
ChrIII:173440 to 172950 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All RIM1 GO evidence and references
  View Computational GO annotations for RIM1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 8 genes
Resources
Classical genetics
null
Large-scale survey
null
Resources
239 total interaction(s) for 187 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 47
  • Affinity Capture-RNA: 4
  • Affinity Capture-Western: 2
  • Co-fractionation: 1
  • PCA: 29
  • Reconstituted Complex: 1
  • Two-hybrid: 2

Genetic Interactions
  • Negative Genetic: 134
  • Phenotypic Suppression: 1
  • Positive Genetic: 11
  • Synthetic Growth Defect: 3
  • Synthetic Lethality: 3
  • Synthetic Rescue: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 135
Molecular Weight (Da) 15,386
Isoelectric Point (pI) 9.04
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIII:173440 to 172950 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2000-09-13
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..242 173440..173199 2011-02-03 2000-09-13
Intron 243..325 173198..173116 2011-02-03 2000-09-13
CDS 326..491 173115..172950 2011-02-03 2000-09-13
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000007222
References cited on this page View Complete Literature Guide for RIM1
1) Van Dyck E, et al.  (1992) A single-stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB. EMBO J 11(9):3421-30
2) Li Z, et al.  (1998) Glucose repression on RIM1, a gene encoding a mitochondrial single-stranded DNA-binding protein, in Saccharomyces cerevisiae: a possible regulation at pre-mRNA splicing. Curr Genet 34(5):351-9