SSH1/YBR283C Summary Help

Standard Name SSH1 (see Nomenclature conflict Note)
Systematic Name YBR283C
Feature Type ORF, Verified
Description Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential (1, 2)
Name Description Sec Sixty-one Homolog 1
Chromosomal Location
ChrII:770415 to 768943 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All SSH1 GO evidence and references
  View Computational GO annotations for SSH1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Classical genetics
null
Large-scale survey
null
overexpression
Resources
255 total interaction(s) for 139 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 6
  • Affinity Capture-RNA: 2
  • PCA: 36
  • Reconstituted Complex: 1

Genetic Interactions
  • Dosage Rescue: 2
  • Negative Genetic: 109
  • Phenotypic Enhancement: 51
  • Phenotypic Suppression: 29
  • Positive Genetic: 9
  • Synthetic Growth Defect: 5
  • Synthetic Lethality: 4
  • Synthetic Rescue: 1

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrII:770415 to 768943 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1997-01-28
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1473 770415..768943 2011-02-03 1997-01-28
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000487

NOMENCLATURE CONFLICT NOTE

NameRelevanceDescription
SSQ1Nomenclature conflictSSH1 has been used to refer to both SSQ1/YLR369W, which encodes a mitochondrial matrix chaperone, and SSH1/YBR283C, which encodes a protein involved in co-translational protein targeting to the endoplasmic reticulum.
MDL2Nomenclature conflictSSH1 has been used to refer to both MDL2/YPL270W, which encodes a mitochondrial inner membrane transporter, and SSH1/YBR283C, which encodes a protein involved in co-translational protein targeting to the endoplasmic reticulum.
References cited on this page View Complete Literature Guide for SSH1
1) Finke K, et al.  (1996) A second trimeric complex containing homologs of the Sec61p complex functions in protein transport across the ER membrane of S. cerevisiae. EMBO J 15(7):1482-94
2) Robb A and Brown JD  (2001) Protein transport: two translocons are better than one. Mol Cell 8(3):484-6