AVT5/YBL089W Summary Help

Standard Name AVT5 1
Systematic Name YBL089W
Feature Type ORF, Verified
Description Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; AVT5 has a paralog, AVT6, that arose from the whole genome duplication (1, 2)
Name Description Amino acid Vacuolar Transport 1
Chromosomal Location
ChrII:49574 to 50953 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All AVT5 GO evidence and references
  View Computational GO annotations for AVT5
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 86 genes
Resources
Large-scale survey
null
Resources
78 total interaction(s) for 54 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 1
  • PCA: 1
  • Protein-RNA: 1

Genetic Interactions
  • Negative Genetic: 63
  • Positive Genetic: 8
  • Synthetic Growth Defect: 2
  • Synthetic Lethality: 1
  • Synthetic Rescue: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 459
Molecular Weight (Da) 50,891
Isoelectric Point (pI) 9.12
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrII:49574 to 50953 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2003-09-22
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1380 49574..50953 2011-02-03 2003-09-22
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | TCDB | UniProtKB
Primary SGDIDS000000185
References cited on this page View Complete Literature Guide for AVT5
1) Russnak R, et al.  (2001) A family of yeast proteins mediating bidirectional vacuolar amino acid transport. J Biol Chem 276(26):23849-57
2) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61