| Standard Name | POL12 |
|---|---|
| Systematic Name | YBL035C |
| Feature Type | ORF, Verified |
| Description | B subunit of DNA polymerase alpha-primase complex, required for initiation of DNA replication during mitotic and premeiotic DNA synthesis; also functions in telomere capping and length regulation (1, 2, 3 and see Summary Paragraph) |
| Name Description | POLymerase |
| Chromosomal Location | |
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| Note: this feature is encoded on the Crick strand. | |
| View Computational GO annotations for POL12 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated |
| Classical genetics | |
|---|---|
| conditional | |
| null | |
| unspecified | |
| Large-scale survey | |
| conditional | |
| null | |
| reduction of function | |
| repressible | |
| Resources |
| 133 total interaction(s) for 106 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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| Resources |
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
| Note: this feature is encoded on the Crick strand. | |||||||||||||
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| Last Update | Coordinates: 2011-02-03 | Sequence: 1997-01-28 | ||||||||||||
| Subfeature details |
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| Retrieve sequences | |||||||||||||
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000000131 |
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POL12 is an essential gene (4); it encodes the second largest (79kD), or B, subunit of DNA polymerase alpha (5), formerly called DNA polymerase I (6; reviewed in 7, 8; also see 5). The B subunit executes its essential function during the initiation of DNA replication (4). Yeast DNA polymerase alpha comprises four subunits, of MW 167 kD (Pol1p), 79 kD (Pol12p), 62 kD (Pri2p), and 48 kD (Pri1p). Polymerase alpha is required for DNA replication; it is involved both in initiation and in priming Okazaki fragments during lagging strand elongation. It has no associated proofreading exonuclease activity; the two smaller subunits form the primase activity that synthesizes short RNA primers in DNA replication. In yeast, DNA polymerase alpha activity is required for premeiotic DNA replication and sporulation and for double-strand break repair (9), but not for other DNA repair synthesis (10, 11). All four subunits of DNA polymerase alpha are assembled, and can be co-immunoprecipitated, throughout the cell cycle (12). In addition, affinity chromatography detects physical interactions between the polymerase and several other proteins (13), including Spt16p and Pob3p 14. The B subunit (Pol12p) is phosphorylated in a cell cycle dependent manner (15); association with the 167 kD subunit (Pol1p) is necessary for B subunit phosphorylation (12). Like many other genes encoding DNA replication proteins, POL12 is transcribed during late G1 and S phases of the cell cycle (15). The POL12 promoter contains two MluI cell cycle boxes (MCBs) (15), which are bound by the Swi6p-Mbp1p complex (reviewed in 16 17).
| 1) | Foiani M, et al. (1996) A meiosis-specific protein kinase, Ime2, is required for the correct timing of DNA replication and for spore formation in yeast meiosis. Mol Gen Genet 253(3):278-88 |
| 2) | Biswas SB, et al. (2003) Subunit interactions in the assembly of Saccharomyces cerevisiae DNA polymerase alpha. Nucleic Acids Res 31(8):2056-65 |
| 3) | Grossi S, et al. (2004) Pol12, the B subunit of DNA polymerase alpha, functions in both telomere capping and length regulation. Genes Dev 18(9):992-1006 |
| 4) | Foiani M, et al. (1994) The B subunit of the DNA polymerase alpha-primase complex in Saccharomyces cerevisiae executes an essential function at the initial stage of DNA replication. Mol Cell Biol 14(2):923-33 |
| 5) | Plevani P, et al. (1988) The yeast DNA polymerase-primase complex: genes and proteins. Biochim Biophys Acta 951(2-3):268-73 |
| 6) | Burgers PM, et al. (1990) Revised nomenclature for eukaryotic DNA polymerases. Eur J Biochem 191(3):617-8 |
| 7) | Burgers PM (1998) Eukaryotic DNA polymerases in DNA replication and DNA repair. Chromosoma 107(4):218-27 |
| 8) | Sugino A (1995) Yeast DNA polymerases and their role at the replication fork. Trends Biochem Sci 20(8):319-23 |
| 9) | Holmes AM and Haber JE (1999) Double-strand break repair in yeast requires both leading and lagging strand DNA polymerases. Cell 96(3):415-24 |
| 10) | Budd ME, et al. (1989) DNA polymerase I is required for premeiotic DNA replication and sporulation but not for X-ray repair in Saccharomyces cerevisiae. Mol Cell Biol 9(2):365-76 |
| 11) | Wang Z, et al. (1993) DNA repair synthesis during base excision repair in vitro is catalyzed by DNA polymerase epsilon and is influenced by DNA polymerases alpha and delta in Saccharomyces cerevisiae. Mol Cell Biol 13(2):1051-8 |
| 12) | Ferrari M, et al. (1996) Phosphorylation of the DNA polymerase alpha-primase B subunit is dependent on its association with the p180 polypeptide. J Biol Chem 271(15):8661-6 |
| 13) | Miles J and Formosa T (1992) Protein affinity chromatography with purified yeast DNA polymerase alpha detects proteins that bind to DNA polymerase. Proc Natl Acad Sci U S A 89(4):1276-80 |
| 14) | Wittmeyer J and Formosa T (1997) The Saccharomyces cerevisiae DNA polymerase alpha catalytic subunit interacts with Cdc68/Spt16 and with Pob3, a protein similar to an HMG1-like protein. Mol Cell Biol 17(7):4178-90 |
| 15) | Foiani M, et al. (1995) Cell cycle-dependent phosphorylation and dephosphorylation of the yeast DNA polymerase alpha-primase B subunit. Mol Cell Biol 15(2):883-91 |
| 16) | Koch C and Nasmyth K (1994) Cell cycle regulated transcription in yeast. Curr Opin Cell Biol 6(3):451-9 |
| 17) | Breeden L (1996) Start-specific transcription in yeast. Curr Top Microbiol Immunol 208():95-127 |





