VPS62/YGR141W Summary Help

Standard Name VPS62 1
Systematic Name YGR141W
Feature Type ORF, Verified
Description Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication (1, 2)
Name Description Vacuolar Protein Sorting 1
Chromosomal Location
ChrVII:770569 to 771972 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All VPS62 GO evidence and references
  View Computational GO annotations for VPS62
Molecular Function
Manually curated
Biological Process
High-throughput
Cellular Component
High-throughput
Regulators 9 genes
Resources
Classical genetics
null
Large-scale survey
null
overexpression
Resources
9 total interaction(s) for 8 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 2

Genetic Interactions
  • Negative Genetic: 2
  • Synthetic Growth Defect: 5

Resources
Expression Summary
histogram
Resources
Length (a.a.) 467
Molecular Weight (Da) 54,515
Isoelectric Point (pI) 8.15
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrVII:770569 to 771972 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1404 770569..771972 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003373
References cited on this page View Complete Literature Guide for VPS62
1) Bonangelino CJ, et al.  (2002) Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae. Mol Biol Cell 13(7):2486-501
2) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61