UBX5/YDR330W Summary Help

Standard Name UBX5 1
Systematic Name YDR330W
Feature Type ORF, Verified
Description UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX (1)
Name Description UBiquitin regulatory X 1
Chromosomal Location
ChrIV:1127872 to 1129374 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All UBX5 GO evidence and references
  View Computational GO annotations for UBX5
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
High-throughput
Regulators 53 genes
Resources
Classical genetics
null
Large-scale survey
null
overexpression
Resources
45 total interaction(s) for 31 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 10
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 5
  • Biochemical Activity: 8
  • Two-hybrid: 6

Genetic Interactions
  • Dosage Growth Defect: 1
  • Dosage Lethality: 1
  • Negative Genetic: 11
  • Phenotypic Suppression: 1
  • Synthetic Growth Defect: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 500
Molecular Weight (Da) 56,736
Isoelectric Point (pI) 4.38
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIV:1127872 to 1129374 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1503 1127872..1129374 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000002738
References cited on this page View Complete Literature Guide for UBX5
1) Schuberth C, et al.  (2004) Shp1 and Ubx2 are adaptors of Cdc48 involved in ubiquitin-dependent protein degradation. EMBO Rep 5(8):818-24