UBP5/YER144C Summary Help

Standard Name UBP5 1
Systematic Name YER144C
Feature Type ORF, Verified
Description Putative ubiquitin-specific protease; concentrates at the bud neck; UBP5 has a paralog, DOA4, that arose from the whole genome duplication (1, 2, 3, 4)
Name Description UBiquitin-specific Protease 1
Chromosomal Location
ChrV:460223 to 457806 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All UBP5 GO evidence and references
  View Computational GO annotations for UBP5
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
overexpression
Large-scale survey
null
overexpression
Resources
29 total interaction(s) for 27 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 2
  • Protein-RNA: 1
  • Two-hybrid: 9

Genetic Interactions
  • Dosage Rescue: 3
  • Negative Genetic: 12
  • Positive Genetic: 1
  • Synthetic Lethality: 1

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrV:460223 to 457806 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2418 460223..457806 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000946
References cited on this page View Complete Literature Guide for UBP5
1) Xiao W, et al.  (1994) UBP5 encodes a putative yeast ubiquitin-specific protease that is related to the human Tre-2 oncogene product. Yeast 10(11):1497-502
2) Papa FR, et al.  (1999) Interaction of the Doa4 deubiquitinating enzyme with the yeast 26S proteasome. Mol Biol Cell 10(3):741-56
3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
4) Amerik A, et al.  (2006) A conserved late endosome-targeting signal required for Doa4 deubiquitylating enzyme function. J Cell Biol 175(5):825-35