UBP16/YPL072W Summary Help

Standard Name UBP16 1
Systematic Name YPL072W
Feature Type ORF, Verified
Description Deubiquitinating enzyme anchored to the outer mitochondrial membrane; probably not important for general mitochondrial functioning, but may perform a more specialized function at mitochondria (2, 3)
Name Description UBiquitin-specific Protease 1
Chromosomal Location
ChrXVI:418512 to 420011 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All UBP16 GO evidence and references
  View Computational GO annotations for UBP16
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 1 genes
Resources
Classical genetics
null
Large-scale survey
null
Resources
13 total interaction(s) for 11 unique genes/features.
Physical Interactions
  • Affinity Capture-RNA: 1

Genetic Interactions
  • Dosage Growth Defect: 1
  • Negative Genetic: 6
  • Phenotypic Enhancement: 2
  • Positive Genetic: 3

Resources
Expression Summary
histogram
Resources
Length (a.a.) 499
Molecular Weight (Da) 56,920
Isoelectric Point (pI) 9.85
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:418512 to 420011 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1500 418512..420011 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000005993
References cited on this page View Complete Literature Guide for UBP16
1) Amerik AY, et al.  (2000) Analysis of the deubiquitinating enzymes of the yeast Saccharomyces cerevisiae. Biol Chem 381(9-10):981-92
2) Hochstrasser M  (1996) Ubiquitin-dependent protein degradation. Annu Rev Genet 30:405-39
3) Kinner A and Kolling R  (2003) The yeast deubiquitinating enzyme Ubp16 is anchored to the outer mitochondrial membrane. FEBS Lett 549(1-3):135-40