| Standard Name | TRM13 1 |
|---|---|
| Systematic Name | YOL125W |
| Feature Type | ORF, Verified |
| Description | 2'-O-methyltransferase responsible for modification of tRNA at position 4; C-terminal domain has similarity to Rossmann-fold (RFM) superfamily of RNA methyltransferases (1, 2) |
| Name Description | TRna Methyltransferase 1 |
| Chromosomal Location | |
|---|---|
Gene Ontology Annotations All TRM13 GO evidence and references
| View Computational GO annotations for TRM13 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| High-throughput |
Mutant phenotypes All TRM13 Phenotype evidence and references
| Large-scale survey | |
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| null |
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| overexpression | |
| Resources |
interactions All TRM13 Interaction evidence and references
| 12 total interaction(s) for 12 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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Expression Summary
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| Resources |
Protein Information All TRM13 Protein evidence and references
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
sequence information
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| Last Update | Coordinates: 2006-01-05 | Sequence: 2011-02-03 | ||||||||||||
| Subfeature details |
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| Retrieve sequences | |||||||||||||
Analyze Sequence
| S288C only | |
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| S288C vs. other species | |
| S288C vs. other strains |
Resources
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000005485 |
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References cited on this page View Complete Literature Guide for TRM13
| 1) | Wilkinson ML, et al. (2007) The 2'-O-methyltransferase responsible for modification of yeast tRNA at position 4. RNA 13(3):404-13 |
| 2) | Tkaczuk KL (2010) Trm13p, the tRNA:Xm4 modification enzyme from Saccharomyces cerevisiae is a member of the Rossmann-fold MTase superfamily: prediction of structure and active site. J Mol Model 16(3):599-606 |




