| Standard Name | TPI1 |
|---|---|
| Systematic Name | YDR050C |
| Feature Type | ORF, Verified |
| Description | Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region; inhibition of Tpi1p activity by PEP (phosphoenolpyruvate) stimulates redox metabolism in respiring cells; E104D mutation in human TPI causes a rare autosomal disease (1, 2, 3, 4, 5 and see Summary Paragraph) |
| Name Description | Triose-Phosphate Isomerase 3 |
| Chromosomal Location | |
|---|---|
| Note: this feature is encoded on the Crick strand. | |
| View Computational GO annotations for TPI1 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated | |
| High-throughput |
| Pathways |
|---|
| Classical genetics | |
|---|---|
| conditional |
|
| Large-scale survey | |
| null |
|
| reduction of function | |
| Resources |
| 43 total interaction(s) for 35 unique genes/features. | |
| Physical Interactions |
|
| Genetic Interactions |
|
| Resources |
|
|
| |
| Resources |
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
| Note: this feature is encoded on the Crick strand. | |||||||||||||
|
| |||||||||||||
| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
| ||||||||||||
| Retrieve sequences | |||||||||||||
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
|---|
| Primary SGDID | S000002457 |
|---|
Glycolysis is the lysis, or splitting, of one molecule of glucose into two molecules of pyruvate, producing a net gain of two ATP molecules. Pyruvate can then be used in anaerobic (fermentation) or aerobic (respiration) metabolism. The glycolysis pathway and the genes involved are illustrated here.
During glycolysis, Tpi1p (triose phosphate isomerase) catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (3, 6). It is required for growth on glucose as the sole carbon source (6). In Saccharomyces cerevisiae, Tpi1p is an abundant glycolytic enzyme that makes up about 2% of the soluble cellular protein (2).
Tpi1p functions as a homodimer (7) and the active site residues include Glu165, His95, and Lys12. The catalytic site Glu and His residues are thought to extract and donate protons during catalysis (7, 8). The sequence around the active site residues is fully conserved in a number of organisms including chicken, yeast and Trypanosoma brucei (9).
The expression of TPI1 may be regulated by the transcriptional activators Reb1p, Rap1p, and Gcr1p that bind sites in the 5' non-coding region of TPI1. However, Gcr1p is able to activate gene expression in the absence of Reb1p or Rap1p. Therefore, it has been suggested that Gcr1p is required for activation of TPI1 and that the role of Reb1p and Rap1p, which bind adjacent to Gcr1p-binding sites, may be to facilitate or modulate Gcr1p binding in vivo (2).
In humans, deficiency of triosephosphate isomerase (TPI1) (OMIM) causes
| 1) | Krieger K and Ernst JF (1994) Iron regulation of triosephosphate isomerase transcript stability in the yeast Saccharomyces cerevisiae. Microbiology 140 ( Pt 5):1079-84 |
| 2) | Scott EW and Baker HV (1993) Concerted action of the transcriptional activators REB1, RAP1, and GCR1 in the high-level expression of the glycolytic gene TPI. Mol Cell Biol 13(1):543-50 |
| 3) | Alber T and Kawasaki G (1982) Nucleotide sequence of the triose phosphate isomerase gene of Saccharomyces cerevisiae. J Mol Appl Genet 1(5):419-34 |
| 4) | Gruning NM, et al. (2011) Pyruvate Kinase Triggers a Metabolic Feedback Loop that Controls Redox Metabolism in Respiring Cells. Cell Metab 14(3):415-27 |
| 5) | Rodriguez-Almazan C, et al. (2008) Structural basis of human triosephosphate isomerase deficiency: mutation E104D is related to alterations of a conserved water network at the dimer interface. J Biol Chem 283(34):23254-63 |
| 6) | Compagno C, et al. (2001) Alterations of the glucose metabolism in a triose phosphate isomerase-negative Saccharomyces cerevisiae mutant. Yeast 18(7):663-70 |
| 7) | Lolis E, et al. (1990) Structure of yeast triosephosphate isomerase at 1.9-A resolution. Biochemistry 29(28):6609-18 |
| 8) | Joseph-McCarthy D, et al. (1994) Crystal structure of the mutant yeast triosephosphate isomerase in which the catalytic base glutamic acid 165 is changed to aspartic acid. Biochemistry 33(10):2824-9 |
| 9) | Wierenga RK, et al. (1992) Comparison of the refined crystal structures of liganded and unliganded chicken, yeast and trypanosomal triosephosphate isomerase. J Mol Biol 224(4):1115-26 |
| 10) | Olah J, et al. (2002) Triosephosphate isomerase deficiency: a neurodegenerative misfolding disease. Biochem Soc Trans 30(2):30-8 |





