SWP1/YMR149W Summary Help

Standard Name SWP1 1
Systematic Name YMR149W
Feature Type ORF, Verified
Description Delta subunit of the oligosaccharyl transferase glycoprotein complex, which is required for N-linked glycosylation of proteins in the endoplasmic reticulum (1, 2 and see Summary Paragraph)
Name Description Suppressor of a WbP1 mutation 1
Chromosomal Location
ChrXIII:560996 to 561856 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All SWP1 GO evidence and references
  View Computational GO annotations for SWP1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Large-scale survey
conditional
null
overexpression
reduction of function
Resources
261 total interaction(s) for 214 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 20
  • Affinity Capture-RNA: 3
  • Affinity Capture-Western: 16
  • Co-purification: 6
  • PCA: 62
  • Two-hybrid: 1

Genetic Interactions
  • Dosage Rescue: 2
  • Negative Genetic: 118
  • Positive Genetic: 25
  • Synthetic Growth Defect: 2
  • Synthetic Lethality: 6

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIII:560996 to 561856 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..861 560996..561856 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000004757
SUMMARY PARAGRAPH for SWP1

During N-linked glycosylation of proteins, oligosaccharide chains are assembled on the carrier molecule dolichyl pyrophosphate in the following order: 2 molecules of N-acetylglucosamine (GlcNAc), 9 molecules of mannose, and 3 molecules of glucose. These 14-residue oligosaccharide cores are then transferred to asparagine residues on nascent polypeptide chains in the endoplasmic reticulum (ER). As proteins progress through the Golgi apparatus, the oligosaccharide cores are modified by trimming and extension to generate a diverse array of glycosylated proteins (reviewed in 3, 4).

The oligosaccharyl transferase complex (OST complex) (EC 2.4.1.119) transfers 14-sugar branched oligosaccharides from dolichyl pyrophosphate to asparagine residues. The complex contains nine protein subunits: Ost1p, Ost2p, Ost3p, Ost4p, Ost5p, Ost6p, Stt3p, Swp1p, and Wbp1p, all of which are integral membrane proteins of the ER. The OST complex interacts with the Sec61p pore complex (5) involved in protein import into the ER.

Swp1p is the delta subunit of the OST complex, one of the original six subunits purified (2). It was originally isolated as an allele-specific high-copy suppressor of the wbpl-2 mutant (1). SWP1 is essential, and its depletion leads to loss of transferase activity (1). Swp1p is related to the carboxy terminal half of mammalian ribophorin II (OMIM) (2).

Last updated: 2005-06-27

References cited on this page View Complete Literature Guide for SWP1
1) te Heesen S, et al.  (1993) Yeast Wbp1p and Swp1p form a protein complex essential for oligosaccharyl transferase activity. EMBO J 12(1):279-84
2) Kelleher DJ and Gilmore R  (1994) The Saccharomyces cerevisiae oligosaccharyltransferase is a protein complex composed of Wbp1p, Swp1p, and four additional polypeptides. J Biol Chem 269(17):12908-17
3) Herscovics A and Orlean P  (1993) Glycoprotein biosynthesis in yeast. FASEB J 7(6):540-50
4) Burda P and Aebi M  (1999) The dolichol pathway of N-linked glycosylation. Biochim Biophys Acta 1426(2):239-57
5) Chavan M, et al.  (2005) Subunits of the translocon interact with components of the oligosaccharyl transferase complex. J Biol Chem 280(24):22917-24