SRB4/YER022W Summary Help

Standard Name SRB4 1
Systematic Name YER022W
Alias MED17 2
Feature Type ORF, Verified
Description Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; homozygosity of the human MED17 L371P mutation is associated with infantile cerebral and cerebellar atrophy with poor myelination (1, 3, 4)
Name Description Suppressor of RNA polymerase B 1
Chromosomal Location
ChrV:198812 to 200875 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All SRB4 GO evidence and references
  View Computational GO annotations for SRB4
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
conditional
Large-scale survey
null
overexpression
reduction of function
Resources
321 total interaction(s) for 97 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 127
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 65
  • Co-localization: 2
  • Co-purification: 50
  • PCA: 1
  • Reconstituted Complex: 14
  • Two-hybrid: 13

Genetic Interactions
  • Dosage Lethality: 1
  • Dosage Rescue: 2
  • Negative Genetic: 22
  • Phenotypic Enhancement: 4
  • Positive Genetic: 4
  • Synthetic Lethality: 3
  • Synthetic Rescue: 12

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrV:198812 to 200875 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2064 198812..200875 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000824
References cited on this page View Complete Literature Guide for SRB4
1) Thompson CM, et al.  (1993) A multisubunit complex associated with the RNA polymerase II CTD and TATA-binding protein in yeast. Cell 73(7):1361-75
2) Bourbon HM, et al.  (2004) A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. Mol Cell 14(5):553-7
3) Kornberg RD  (2005) Mediator and the mechanism of transcriptional activation. Trends Biochem Sci 30(5):235-9
4) Kaufmann R, et al.  (2010) Infantile Cerebral and Cerebellar Atrophy Is Associated with a Mutation in the MED17 Subunit of the Transcription Preinitiation Mediator Complex. Am J Hum Genet 87(5):667-70