| Standard Name | SOE1 1 |
|---|---|
| Systematic Name | tE(UUC)G1 |
| Feature Type | tRNA |
| Description | Glutamate tRNA (tRNA-Glu), predicted by tRNAscan-SE analysis; thiolation of uridine at wobble position (34) requires Ncs6p; can mutate to become a missense suppressor tRNA that inserts glutamate residues at lysine codons; target of K. lactis zymocin (1, 2, 3, 4) |
| Name Description | Suppressor Of cdcEight 1 |
| Chromosomal Location | |
|---|---|
| Genetic position: -63 cM |
Gene Ontology Annotations All SOE1 GO evidence and references
| Molecular Function | |
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| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated |
interactions All SOE1 Interaction evidence and references
| 1 total interaction(s) for 1 unique genes/features. | |
| Genetic Interactions |
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| Resources |
sequence information
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| Genetic position: -63 cM | |||||||||||||
| Last Update | Coordinates: 2011-02-03 | Sequence: 2000-05-19 | ||||||||||||
| Subfeature details |
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| Retrieve sequences | |||||||||||||
Analyze Sequence
| S288C only | |
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| S288C vs. other species |
Resources
| External Links | All Associated Seq | Search all NCBI (Entrez) |
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| Primary SGDID | S000006553 |
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References cited on this page View Complete Literature Guide for SOE1
| 1) | Su JY, et al. (1990) Genetic and molecular analysis of the SOE1 gene: a tRNA(3Glu) missense suppressor of yeast cdc8 mutations. Genetics 124(3):523-31 |
| 2) | Bjork GR, et al. (2007) A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast. RNA 13(8):1245-55 |
| 3) | Huang B, et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94 |
| 4) | Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 |
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