SOE1/tE(UUC)G1 Summary Help

Standard Name SOE1 1
Systematic Name tE(UUC)G1
Feature Type tRNA
Description Glutamate tRNA (tRNA-Glu), predicted by tRNAscan-SE analysis; thiolation of uridine at wobble position (34) requires Ncs6p; can mutate to become a missense suppressor tRNA that inserts glutamate residues at lysine codons; target of K. lactis zymocin (1, 2, 3, 4)
Name Description Suppressor Of cdcEight 1
Chromosomal Location
ChrVII:328583 to 328654 | ORF Map | GBrowse
Gbrowse
Genetic position: -63 cM
Gene Ontology Annotations All SOE1 GO evidence and references
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Large-scale survey
null
1 total interaction(s) for 1 unique genes/features.
Genetic Interactions
  • Synthetic Rescue: 1

Resources
sequence information
ChrVII:328583 to 328654 | ORF Map | GBrowse
SGD ORF map
Genetic position: -63 cM
Last Update Coordinates: 2011-02-03 | Sequence: 2000-05-19
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
Noncoding exon 1..72 328583..328654 2011-02-03 2000-05-19
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
Resources
External Links All Associated Seq | Search all NCBI (Entrez)
Primary SGDIDS000006553
References cited on this page View Complete Literature Guide for SOE1
1) Su JY, et al.  (1990) Genetic and molecular analysis of the SOE1 gene: a tRNA(3Glu) missense suppressor of yeast cdc8 mutations. Genetics 124(3):523-31
2) Bjork GR, et al.  (2007) A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast. RNA 13(8):1245-55
3) Huang B, et al.  (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94
4) Chan PP and Lowe TM  (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7