SNU71/YGR013W Summary Help

Standard Name SNU71 1
Systematic Name YGR013W
Feature Type ORF, Verified
Description Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart (1, 2)
Name Description Small NUclear ribonucleoprotein associated 1
Chromosomal Location
ChrVII:514554 to 516416 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All SNU71 GO evidence and references
  View Computational GO annotations for SNU71
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 5 genes
Resources
Large-scale survey
conditional
null
overexpression
reduction of function
Resources
134 total interaction(s) for 51 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 106
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 4
  • Co-purification: 1
  • Reconstituted Complex: 3
  • Two-hybrid: 5

Genetic Interactions
  • Dosage Growth Defect: 3
  • Dosage Lethality: 1
  • Negative Genetic: 2
  • Positive Genetic: 1
  • Synthetic Lethality: 6

Resources
Expression Summary
histogram
Resources
Length (a.a.) 620
Molecular Weight (Da) 71,382
Isoelectric Point (pI) 4.71
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrVII:514554 to 516416 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1863 514554..516416 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000003245
References cited on this page View Complete Literature Guide for SNU71
1) Gottschalk A, et al.  (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93
2) Stevens SW, et al.  (2002) Composition and functional characterization of the yeast spliceosomal penta-snRNP. Mol Cell 9(1):31-44