SNN1/YNL086W Summary Help

Standard Name SNN1 1
Systematic Name YNL086W
Feature Type ORF, Verified
Description Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to endosomes (1, 2, 3)
Name Description SNapiN 1
Chromosomal Location
ChrXIV:466334 to 466642 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All SNN1 GO evidence and references
  View Computational GO annotations for SNN1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Classical genetics
null
Large-scale survey
null
Resources
117 total interaction(s) for 91 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 2
  • Co-purification: 1
  • Two-hybrid: 24

Genetic Interactions
  • Negative Genetic: 79
  • Positive Genetic: 3
  • Synthetic Growth Defect: 1
  • Synthetic Lethality: 7

Resources
Expression Summary
histogram
Resources
Length (a.a.) 102
Molecular Weight (Da) 11,461
Isoelectric Point (pI) 5.23
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIV:466334 to 466642 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..309 466334..466642 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Retired NameBLS1
Primary SGDIDS000005030
References cited on this page View Complete Literature Guide for SNN1
1) Hayes MJ, et al.  (2011) Yeast Homologues of Three BLOC-1 Subunits Highlight KxDL Proteins As Conserved Interactors of BLOC-1. Traffic 12(3):260-8
2) Huh WK, et al.  (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91
3) John Peter AT, et al.  (2013) The BLOC-1 complex promotes endosomal maturation by recruiting the Rab5 GTPase-activating protein Msb3. J Cell Biol 201(1):97-111