SGN1/YIR001C Summary Help

Standard Name SGN1 1
Systematic Name YIR001C
Alias RBP1 , RBP29
Feature Type ORF, Verified
Description Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation (2)
Name Description Slower Growth on Non-fermentable carbon sources 1
Chromosomal Location
ChrIX:356895 to 356143 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All SGN1 GO evidence and references
  View Computational GO annotations for SGN1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 105 genes
Resources
Classical genetics
overexpression
Large-scale survey
null
overexpression
Resources
97 total interaction(s) for 68 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 33
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 2
  • Biochemical Activity: 1
  • PCA: 3
  • Protein-peptide: 1
  • Two-hybrid: 3

Genetic Interactions
  • Dosage Growth Defect: 4
  • Dosage Rescue: 3
  • Negative Genetic: 38
  • Positive Genetic: 4
  • Synthetic Growth Defect: 4

Resources
Expression Summary
histogram
Resources
Length (a.a.) 250
Molecular Weight (Da) 28,954
Isoelectric Point (pI) 10.13
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIX:356895 to 356143 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1994-12-10
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..753 356895..356143 2011-02-03 1994-12-10
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000001440
References cited on this page View Complete Literature Guide for SGN1
1) Entian KD, et al.  (1999) Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Mol Gen Genet 262(4-5):683-702
2) Winstall E, et al.  (2000) The Saccharomyces cerevisiae RNA-binding protein Rbp29 functions in cytoplasmic mRNA metabolism. J Biol Chem 275(29):21817-26