| Standard Name | SED1 1 |
|---|---|
| Systematic Name | YDR077W |
| Feature Type | ORF, Verified |
| Description | Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication (2, 3, 4, 5, 6, 7) |
| Name Description | Suppression of Exponential Defect 1 |
| Chromosomal Location | |
|---|---|
Gene Ontology Annotations All SED1 GO evidence and references
| View Computational GO annotations for SED1 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated |
Mutant phenotypes All SED1 Phenotype evidence and references
| Classical genetics | |
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| null |
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| Large-scale survey | |
| null |
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| overexpression | |
| Resources |
interactions All SED1 Interaction evidence and references
| 37 total interaction(s) for 31 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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Expression Summary
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| Resources |
Protein Information All SED1 Protein evidence and references
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
sequence information
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| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
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| Retrieve sequences | |||||||||||||
Analyze Sequence
| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
Resources
| External Links | All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000002484 |
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References cited on this page View Complete Literature Guide for SED1
| 1) | Drebot MA, et al. (1987) A yeast mutant conditionally defective only for reentry into the mitotic cell cycle from stationary phase. Proc Natl Acad Sci U S A 84(22):7948-52 |
| 2) | Shimoi H, et al. (1998) Sed1p is a major cell wall protein of Saccharomyces cerevisiae in the stationary phase and is involved in lytic enzyme resistance. J Bacteriol 180(13):3381-7 |
| 3) | Mannazzu I, et al. (2002) SED1 gene length and sequence polymorphisms in feral strains of Saccharomyces cerevisiae. Appl Environ Microbiol 68(11):5437-44 |
| 4) | Oender K, et al. (2003) Translational regulator RpL10p/Grc5p interacts physically and functionally with Sed1p, a dynamic component of the yeast cell surface. Yeast 20(4):281-94 |
| 5) | Bowen S and Wheals AE (2004) Incorporation of Sed1p into the cell wall of Saccharomyces cerevisiae involves KRE6. FEMS Yeast Res 4(7):731-5 |
| 6) | Phadnis N and Ayres Sia E (2004) Role of the putative structural protein Sed1p in mitochondrial genome maintenance. J Mol Biol 342(4):1115-29 |
| 7) | Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61 |




