RTC6/YPL183W-A Summary Help

Standard Name RTC6 1
Systematic Name YPL183W-A
Alias TAE4 2
Feature Type ORF, Verified
Description Protein involved in translation; mutants have defects in biogenesis of nuclear ribosomes; sequence similar to prokaryotic ribosomal protein L36, may be a mitochondrial ribosomal protein; protein abundance increases in response to DNA replication stress (1, 2, 3, 4)
Name Description Restriction of Telomere Capping 1
Chromosomal Location
ChrXVI:199095 to 199376 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All RTC6 GO evidence and references
  View Computational GO annotations for RTC6
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Classical genetics
null
Large-scale survey
null
Resources
132 total interaction(s) for 108 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 3

Genetic Interactions
  • Dosage Rescue: 18
  • Negative Genetic: 76
  • Positive Genetic: 3
  • Synthetic Growth Defect: 28
  • Synthetic Lethality: 1
  • Synthetic Rescue: 3

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXVI:199095 to 199376 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1999-07-17
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..282 199095..199376 2011-02-03 1999-07-17
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Retired NameGON5
Primary SGDIDS000007224
References cited on this page View Complete Literature Guide for RTC6
1) Addinall SG, et al.  (2008) A Genomewide Suppressor and Enhancer Analysis of cdc13-1 Reveals Varied Cellular Processes Influencing Telomere Capping in Saccharomyces cerevisiae. Genetics 180(4):2251-66
2) Alamgir M, et al.  (2010) Chemical-genetic profile analysis of five inhibitory compounds in yeast. BMC Chem Biol 10():6
3) Andrade MA, et al.  (1997) Characterization of new proteins found by analysis of short open reading frames from the full yeast genome. Yeast 13(14):1363-74
4) Tkach JM, et al.  (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76