RNA1/YMR235C Summary Help

Standard Name RNA1
Systematic Name YMR235C
Feature Type ORF, Verified
Description GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport (1, 2)
Name Description RaN GTPase Activating protein
Chromosomal Location
ChrXIII:742735 to 741512 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Genetic position: 159 cM
Gene Ontology Annotations All RNA1 GO evidence and references
  View Computational GO annotations for RNA1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Classical genetics
conditional
null
repressible
Large-scale survey
conditional
null
overexpression
reduction of function
Resources
164 total interaction(s) for 147 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 24
  • Affinity Capture-RNA: 2
  • Affinity Capture-Western: 3
  • Biochemical Activity: 3
  • PCA: 1
  • Reconstituted Complex: 7
  • Two-hybrid: 25

Genetic Interactions
  • Dosage Lethality: 2
  • Dosage Rescue: 4
  • Negative Genetic: 68
  • Phenotypic Enhancement: 1
  • Positive Genetic: 10
  • Synthetic Growth Defect: 1
  • Synthetic Lethality: 8
  • Synthetic Rescue: 5

Resources
Expression Summary
histogram
Resources
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrXIII:742735 to 741512 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
SGD ORF map
Genetic position: 159 cM
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..1224 742735..741512 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000004848
References cited on this page View Complete Literature Guide for RNA1
1) Becker J, et al.  (1995) RNA1 encodes a GTPase-activating protein specific for Gsp1p, the Ran/TC4 homologue of Saccharomyces cerevisiae. J Biol Chem 270(20):11860-5
2) Ryan KJ, et al.  (2003) The Ran GTPase cycle is required for yeast nuclear pore complex assembly. J Cell Biol 160(7):1041-53