| Standard Name | PPN1 1 |
|---|---|
| Systematic Name | YDR452W |
| Alias | PHM5 2 |
| Feature Type | ORF, Verified |
| Description | Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer; relocalizes from vacuole to cytoplasm upon DNA replication stress (1, 3 and see Summary Paragraph) |
| Chromosomal Location | |
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| View Computational GO annotations for PPN1 | |
| Molecular Function | |
| Manually curated | |
| Biological Process | |
| Manually curated | |
| Cellular Component | |
| Manually curated |
| Classical genetics | |
|---|---|
| null | |
| Large-scale survey | |
| null | |
| overexpression | |
| Resources |
| 17 total interaction(s) for 17 unique genes/features. | |
| Physical Interactions |
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| Genetic Interactions |
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| Resources |
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| Resources |
| Localization | |
|---|---|
| Phosphorylation | PhosphoGRID | PhosphoPep Database |
| Structure | |
| Homologs |
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| Last Update | Coordinates: 2011-02-03 | Sequence: 1996-07-31 | ||||||||||||
| Subfeature details |
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| S288C only | |
|---|---|
| S288C vs. other species | |
| S288C vs. other strains |
| External Links | All Associated Seq | E.C. | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB |
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| Primary SGDID | S000002860 |
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Endopolyphosphatases (Ppn1) from yeast and animal cells hydrolyze inorganic polyphosphate (poly P) chains of many hundreds of phosphate residues into shorter lengths (4, 1). The limit digest consists predominantly of chains of 60 (P60) and 3 (P3) Pi residues (4, 1). Ppn1p of Saccharomyces cerevisiae, a homodimer of 35-kDa subunits (about 352-aa) is of vacuolar origin and requires the protease activation of a 75-kDa (674-aa) precursor polypeptide (4, 1, 5). Null mutants in ppn1 accumulate long-chain poly P and are defective in growth in minimal media (1). A double mutant of PPN1 and PPX1 (the gene encoding a potent exopolyphosphatase) loses viability rapidly in stationary phase (1). Whether this loss is a result of the excess of long-chain poly P or to the lack of shorter chains (i.e., poly P60 and P3) is unknown (1). Overexpression of the processed form of Ppn1p should provide a unique and powerful reagent to analyze poly P when the chain termini are unavailable to the actions of polyPase and poly P kinase.
| 1) | Sethuraman A, et al. (2001) The endopolyphosphatase gene: essential in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 98(15):8542-7 |
| 2) | Ogawa N, et al. (2000) New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis. Mol Biol Cell 11(12):4309-21 |
| 3) | Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 |
| 4) | Kumble KD and Kornberg A (1996) Endopolyphosphatases for long chain inorganic polyphosphate in yeast and mammals. J Biol Chem 271(43):27146-51 |
| 5) | Reggiori F and Pelham HR (2001) Sorting of proteins into multivesicular bodies: ubiquitin-dependent and -independent targeting. EMBO J 20(18):5176-86 |






