NOP16/YER002W Summary Help

Standard Name NOP16 1
Systematic Name YER002W
Feature Type ORF, Verified
Description Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis (1, 2)
Name Description NucleOlar Protein 1
Chromosomal Location
ChrV:156803 to 157498 | ORF Map | GBrowse
Gbrowse
Gene Ontology Annotations All NOP16 GO evidence and references
  View Computational GO annotations for NOP16
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Regulators 3 genes
Resources
Classical genetics
null
Large-scale survey
null
Resources
72 total interaction(s) for 58 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 24
  • Affinity Capture-RNA: 1
  • Biochemical Activity: 1
  • PCA: 2

Genetic Interactions
  • Negative Genetic: 17
  • Phenotypic Enhancement: 1
  • Phenotypic Suppression: 2
  • Positive Genetic: 17
  • Synthetic Growth Defect: 3
  • Synthetic Lethality: 3
  • Synthetic Rescue: 1

Resources
Expression Summary
histogram
Resources
Length (a.a.) 231
Molecular Weight (Da) 26,901
Isoelectric Point (pI) 10.07
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrV:156803 to 157498 | ORF Map | GBrowse
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..696 156803..157498 2011-02-03 1996-07-31
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000000804
References cited on this page View Complete Literature Guide for NOP16
1) Harnpicharnchai P, et al.  (2001) Composition and functional characterization of yeast 66S ribosome assembly intermediates. Mol Cell 8(3):505-15
2) Horsey EW, et al.  (2004) Role of the yeast Rrp1 protein in the dynamics of pre-ribosome maturation. RNA 10(5):813-27