JIP4/YDR475C Summary Help

Standard Name JIP4 1
Systematic Name YDR475C
Alias YDR474C
Feature Type ORF, Verified
Description Protein of unknown function; previously annotated as two separate ORFs, YDR474C and YDR475C, which were merged as a result of corrections to the systematic reference sequence; JIP4 has a paralog, YOR019W, that arose from the whole genome duplication (2, 3)
Name Description Jumonji domain Interacting Protein 1
Chromosomal Location
ChrIV:1410094 to 1407464 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
Gbrowse
Gene Ontology Annotations All JIP4 GO evidence and references
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
Regulators 7 genes
Resources
Large-scale survey
null
Resources
41 total interaction(s) for 37 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 11
  • Two-hybrid: 2

Genetic Interactions
  • Negative Genetic: 19
  • Phenotypic Enhancement: 1
  • Positive Genetic: 8

Resources
Expression Summary
histogram
Resources
Length (a.a.) 876
Molecular Weight (Da) 98,690
Isoelectric Point (pI) 10.38
Localization
Phosphorylation PhosphoGRID | PhosphoPep Database
Structure
Homologs
sequence information
ChrIV:1410094 to 1407464 | ORF Map | GBrowse
Note: this feature is encoded on the Crick strand.
This feature contains embedded feature(s): YDR474C
SGD ORF map
Last Update Coordinates: 2011-02-03 | Sequence: 2003-09-30
Subfeature details
Relative
Coordinates
Chromosomal
Coordinates
Most Recent Updates
Coordinates Sequence
CDS 1..2631 1410094..1407464 2011-02-03 2003-09-30
Retrieve sequences
Analyze Sequence
S288C only
S288C vs. other species
S288C vs. other strains
Resources
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | Search all NCBI (Entrez) | UniProtKB
Primary SGDIDS000002883
References cited on this page View Complete Literature Guide for JIP4
1) Tronnersjo S, et al.  (2007) The jmjN and jmjC domains of the yeast zinc finger protein Gis1 interact with 19 proteins involved in transcription, sumoylation and DNA repair. Mol Genet Genomics 277(1):57-70
2) Blandin G, et al.  (2000) Genomic exploration of the hemiascomycetous yeasts: 4. The genome of Saccharomyces cerevisiae revisited. FEBS Lett 487(1):31-6
3) Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61