RIX1/YHR197W Summary Help

RIX1 BASIC INFORMATION

Standard Name RIX1 1
Systematic Name YHR197W
Alias IPI2 2
Feature Type ORF, Verified
Description Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA; Rix1 complex associates with Mdn1p in pre-60S ribosomal particles (1, 2, 3)
Name Description RIbosome eXport 1
GO Annotations All RIX1 GO evidence and references
    View Computational GO annotations for RIX1
Molecular Function
Manually curated
Biological Process
Manually curated
Cellular Component
Manually curated
High-throughput
Mutant Phenotype All RIX1 Phenotype details and references
Classical genetics
conditional
Large-scale survey
conditional
null
Interactions RIX1 All interactions details and references
170 total interaction(s) for 72 unique genes/features.
Physical Interactions
  • Affinity Capture-MS: 111
  • Affinity Capture-RNA: 1
  • Affinity Capture-Western: 50
  • Co-crystal Structure: 1
  • Two-hybrid: 3
Genetic Interactions
  • Phenotypic Enhancement: 2
  • Phenotypic Suppression: 1
  • Synthetic Lethality: 1
Sequence Information
ChrVIII:493896 to 496187 | ORF Map | GBrowse
Gbrowse
Last Update Coordinates: 2005-11-07 | Sequence: 1996-07-31
Subfeature details
Relative
Coordinates		 Chromosomal
Coordinates		 Most Recent Updates
Coordinates Sequence
CDS 1..2292 493896..496187 2005-11-07 1996-07-31
External Links All Associated Seq | Entrez Gene | Entrez RefSeq Protein | MIPS | UniProtKB
Primary SGDIDS000001240

RIX1 RESOURCES

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SGD ORF mapGBrowse
SGD ORF map
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  • Literature
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  • Sequence Analysis Tools
  • Protein Info & Structure
  • Localization Resources
  • Interactions
  • Phenotype Resources
  • Maps & Displays
  • Comparison Resources
  • Functional Analysis

Click on histogram for expression summary
Expression Summary histogram

ADDITIONAL INFORMATION for RIX1

REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for RIX1]

1) Gadal O, et al.  (2001) Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p. Mol Cell Biol 21(10):3405-15
2) Krogan NJ, et al.  (2004) High-definition macromolecular composition of yeast RNA-processing complexes. Mol Cell 13(2):225-39
3) Nissan TA, et al.  (2004) A pre-ribosome with a tadpole-like structure functions in ATP-dependent maturation of 60S subunits. Mol Cell 15(2):295-301